RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 ADAMTS19Q8TE59 1207 aa12.7□□□□□ -0.38
ATG4B-211ENST00000429899 REV3LO60673 3130 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 HMGCRP04035 888 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 CSF1RP07333 972 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 COA7Q96BR5 231 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 OGDHLQ9ULD0 1010 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
ATG4B-211ENST00000429899 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
ATG4B-211ENST00000429899 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 CASP7P55210 303 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 SHHQ15465 462 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 TDRD7Q8NHU6 1098 aaKnown RBP12.68□□□□□ -0.38
ATG4B-211ENST00000429899 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-211ENST00000429899 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 HCN4Q9Y3Q4 1203 aa12.68□□□□□ -0.38
ATG4B-211ENST00000429899 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
ATG4B-211ENST00000429899 COL6A1P12109 1028 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
ATG4B-211ENST00000429899 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
ATG4B-211ENST00000429899 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
ATG4B-211ENST00000429899 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 PPM1EQ8WY54 764 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-211ENST00000429899 MUC6Q6W4X9 2439 aa12.67□□□□□ -0.38
ATG4B-211ENST00000429899 PLIN1O60240 522 aa12.66□□□□□ -0.38
ATG4B-211ENST00000429899 GYG1P46976 350 aa12.66□□□□□ -0.38
ATG4B-211ENST00000429899 C8orf58Q8NAV2 365 aa12.66□□□□□ -0.38
ATG4B-211ENST00000429899 C1QTNF1Q9BXJ1 281 aa12.66□□□□□ -0.38
ATG4B-211ENST00000429899 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-211ENST00000429899 GADL1Q6ZQY3 521 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 ANKRD13CQ8N6S4 541 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 SMCR8Q8TEV9 937 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-211ENST00000429899 HOOK2Q96ED9 719 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 ASB2Q96Q27 587 aa12.65□□□□□ -0.38
ATG4B-211ENST00000429899 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 CXCL11O14625 94 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 VAMP4O75379 141 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 GCKRQ14397 625 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 GRIN2CQ14957 1233 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 NOL9Q5SY16 702 aaKnown RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 APOBEC3HQ6NTF7 200 aaKnown RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
ATG4B-211ENST00000429899 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-211ENST00000429899 BCAR3O75815 825 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
ATG4B-211ENST00000429899 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 TRIB2Q92519 343 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 TEKT1Q969V4 418 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
ATG4B-211ENST00000429899 XIRP2A4UGR9 3374 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 GBF1Q92538 1859 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
ATG4B-211ENST00000429899 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
ATG4B-211ENST00000429899 FOXO4P98177 505 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 MAP3K21Q5TCX8 1036 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 FASTKD5Q7L8L6 764 aaKnown RBP12.62□□□□□ -0.39
ATG4B-211ENST00000429899 SSH1Q8WYL5 1049 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 NECAB3Q96P71 396 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-211ENST00000429899 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 SLC45A1Q9Y2W3 748 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 CACNA1AO00555 2505 aa12.62□□□□□ -0.39
ATG4B-211ENST00000429899 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-211ENST00000429899 TCP10Q12799 353 aa12.61□□□□□ -0.39
ATG4B-211ENST00000429899 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
ATG4B-211ENST00000429899 G2E3Q7L622 706 aa12.61□□□□□ -0.39
ATG4B-211ENST00000429899 FAM151AQ8WW52 585 aa12.61□□□□□ -0.39
ATG4B-211ENST00000429899 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-211ENST00000429899 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
ATG4B-211ENST00000429899 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 PTPRAP18433 802 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 CYP2B6P20813 491 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
ATG4B-211ENST00000429899 CHAF1AQ13111 956 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-211ENST00000429899 PDE3AQ14432 1141 aa12.6□□□□□ -0.39
ATG4B-211ENST00000429899 TREML2Q5T2D2 321 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms