RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ALG1Q9BT22 464 aa14.87□□□□□ -0.03
PTCH1-207ENST00000429896 USP17L8P0C7I0 530 aa14.87□□□□□ -0.03
PTCH1-207ENST00000429896 PDIA6Q15084 440 aa14.87□□□□□ -0.03
PTCH1-207ENST00000429896 IFNL3Q8IZI9 196 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 SLIT3O75094 1523 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 ECM2O94769 699 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-207ENST00000429896 MTX1Q13505 466 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 CHD2O14647 1828 aaKnown RBP14.86□□□□□ -0.03
PTCH1-207ENST00000429896 SDR42E1Q8WUS8 393 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 PLCD4Q9BRC7 762 aa14.86□□□□□ -0.03
PTCH1-207ENST00000429896 STIM1Q13586 685 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 MAP2P11137 1827 aaKnown RBP14.85□□□□□ -0.03
PTCH1-207ENST00000429896 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-207ENST00000429896 SASH1O94885 1247 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 TFAP4Q01664 338 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 RASGRF1Q13972 1273 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 ZBED4O75132 1171 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 IRX3P78415 501 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-207ENST00000429896 CD209Q9NNX6 404 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 STAP2Q9UGK3 403 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
PTCH1-207ENST00000429896 SPDYE3A6NKU9 549 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 CERKLQ49MI3 558 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-207ENST00000429896 CAVIN1Q6NZI2 390 aaKnown RBP14.84□□□□□ -0.03
PTCH1-207ENST00000429896 TMX3Q96JJ7 454 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 TRAK2O60296 914 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 SLC1A4P43007 532 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 ATP8A2Q9NTI2 1148 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 RPS6KB1P23443 525 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 AKNAD1Q5T1N1 836 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 MRE11P49959 708 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 MAGEC2Q9UBF1 373 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-207ENST00000429896 SAMM50Q9Y512 469 aa14.84□□□□□ -0.03
PTCH1-207ENST00000429896 ANKRD62A6NC57 917 aa14.83□□□□□ -0.03
PTCH1-207ENST00000429896 CFAP100Q494V2 611 aa14.83□□□□□ -0.03
PTCH1-207ENST00000429896 RBM25P49756 843 aaKnown RBP14.83□□□□□ -0.03
PTCH1-207ENST00000429896 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.03
PTCH1-207ENST00000429896 A0A0D9SFI3 127 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 RXRAP19793 462 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 MATR3P43243 847 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCH1-207ENST00000429896 MAP7D2Q96T17 732 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 DACH1Q9UI36 760 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 C8orf34Q49A92 452 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCH1-207ENST00000429896 CALML3P27482 149 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 AK2P54819 239 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 MECOMQ03112 1051 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 PI16Q6UXB8 463 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 FAM177A1Q8N128 213 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-207ENST00000429896 CLIP2Q9UDT6 1046 aa14.83□□□□□ -0.04
PTCH1-207ENST00000429896 IVNS1ABPQ9Y6Y0 642 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 SCAND2PQ9GZW5 306 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 BIN2Q9UBW5 565 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 SWAP70Q9UH65 585 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 GNA11P29992 359 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 ADD2P35612 726 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 PABPC4Q13310 644 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 SEC62Q99442 399 aaKnown RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TRIM5Q9C035 493 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 ANTXR1Q9H6X2 564 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 STX6O43752 255 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TGFB2P61812 414 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 SMCR8Q8TEV9 937 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TBC1D2Q9BYX2 928 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 ANGEL1Q9UNK9 670 aaKnown RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 COL14A1Q05707 1796 aaKnown RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 DYNLL1P63167 89 aaKnown RBP14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
PTCH1-207ENST00000429896 TNMDQ9H2S6 317 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 SEPT11Q9NVA2 429 aaKnown RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 MYOM1P52179 1685 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 SNX14Q9Y5W7 946 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 CRKP46108 304 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 DIXDC1Q155Q3 683 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 ZMYM1Q5SVZ6 1142 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 DHX36Q9H2U1 1008 aaKnown RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 ABCB5Q2M3G0 1257 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 TBC1D10BQ4KMP7 808 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 GADL1Q6ZQY3 521 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 PIH1D3Q9NQM4 214 aaKnown RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 HSPD1P10809 573 aaKnown RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 GSPT1P15170 499 aaKnown RBP14.81□□□□□ -0.04
PTCH1-207ENST00000429896 ZNRF3Q9ULT6 936 aa14.81□□□□□ -0.04
PTCH1-207ENST00000429896 IQCA1LA6NCM1 817 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 SYCP1Q15431 976 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 RABL6Q3YEC7 729 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-207ENST00000429896 CALML4Q96GE6 196 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 NEFHP12036 1026 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 E7EWF7 191 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 SIRT2Q8IXJ6 389 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 KRT2P35908 639 aa14.8□□□□□ -0.04
PTCH1-207ENST00000429896 IREB2P48200 963 aaKnown RBP14.8□□□□□ -0.04
PTCH1-207ENST00000429896 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms