RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RXRAP19793 462 aa12.2□□□□□ -0.46
TCOF1-204ENST00000427724 RTN1Q16799 776 aa12.2□□□□□ -0.46
TCOF1-204ENST00000427724 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
TCOF1-204ENST00000427724 GPT2Q8TD30 523 aa12.2□□□□□ -0.46
TCOF1-204ENST00000427724 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
TCOF1-204ENST00000427724 INO80Q9ULG1 1556 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-204ENST00000427724 TRIM75PA6NK02 468 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 MYCLP12524 364 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 COA1Q9GZY4 146 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 PPRC1Q5VV67 1664 aaKnown RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 USP31Q70CQ4 1352 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CALM1P0DP23 149 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CALM2P0DP24 149 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CALM3P0DP25 149 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 NCAPG2Q86XI2 1143 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 PDILTQ8N807 584 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 DPP9Q86TI2 863 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 APPBP2Q92624 585 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 SLC5A4Q9NY91 659 aa12.19□□□□□ -0.46
TCOF1-204ENST00000427724 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-204ENST00000427724 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 FLOT1O75955 427 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 CERS3Q8IU89 383 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 SDR42E1Q8WUS8 393 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
TCOF1-204ENST00000427724 KDRP35968 1356 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 PRC1O43663 620 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 ADORA1P30542 326 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 UVSSAQ2YD98 709 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
TCOF1-204ENST00000427724 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
TCOF1-204ENST00000427724 TFAP4Q01664 338 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
TCOF1-204ENST00000427724 RRP36Q96EU6 259 aaKnown RBP12.18□□□□□ -0.46
TCOF1-204ENST00000427724 CNOT7Q9UIV1 285 aaKnown RBP12.18□□□□□ -0.46
TCOF1-204ENST00000427724 B4E1Z4 1266 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 IDEP14735 1019 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 USH1GQ495M9 461 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 SPICE1Q8N0Z3 855 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 HACL1Q9UJ83 578 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 NBPF26B4DH59 902 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 BRD1O95696 1058 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 FAM47AQ5JRC9 791 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 NBPF10Q6P3W6 841 aaKnown RBP12.17□□□□□ -0.46
TCOF1-204ENST00000427724 NBPF15Q8N660 670 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 TNNT1P13805 278 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 TERF1P54274 439 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 DCCP43146 1447 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-204ENST00000427724 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 SNX14Q9Y5W7 946 aa12.17□□□□□ -0.46
TCOF1-204ENST00000427724 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
TCOF1-204ENST00000427724 ALAS1P13196 640 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.46
TCOF1-204ENST00000427724 ZNF165P49910 485 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 KIF2CQ99661 725 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 GDF11O95390 407 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 CFBP00751 764 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 SGSM2O43147 1006 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
TCOF1-204ENST00000427724 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
TCOF1-204ENST00000427724 SKIDA1Q1XH10 827 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 EAF2Q96CJ1 260 aaPredicted RBP12.15□□□□□ -0.46
TCOF1-204ENST00000427724 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
TCOF1-204ENST00000427724 LMNB1P20700 586 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 HUNKP57058 714 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 ICA1Q05084 483 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 ABCB5Q2M3G0 1257 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 GOPCQ9HD26 462 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
TCOF1-204ENST00000427724 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.47
TCOF1-204ENST00000427724 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-204ENST00000427724 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
TCOF1-204ENST00000427724 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
TCOF1-204ENST00000427724 KIF20AO95235 890 aa12.14□□□□□ -0.47
TCOF1-204ENST00000427724 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-204ENST00000427724 UBA7P41226 1012 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms