RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CDC27P30260 824 aa25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 NASPP49321 788 aaPredicted RBP25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 C15orf52Q6ZUT6 534 aaKnown RBP25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 WDR66Q8TBY9 1149 aa25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 RBSNQ9H1K0 784 aa25.44■■□□□ 1.66
CNEP1R1-202ENST00000427478 GOLGA8AA7E2F4 631 aa25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 C8orf76Q96K31 380 aa25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 CRAMP1Q96RY5 1269 aa25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 CRNKL1Q9BZJ0 848 aaKnown RBP25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 SLC12A7Q9Y666 1083 aa25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 SART3Q15020 963 aaKnown RBP25.43■■□□□ 1.66
CNEP1R1-202ENST00000427478 KLRG2A4D1S0 409 aaPredicted RBP25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 LDHBP07195 334 aaKnown RBP25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 WTAPQ15007 396 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 OTUD7BQ6GQQ9 843 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 GIMAP6Q6P9H5 292 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 NLGN1Q8N2Q7 840 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 LTBP1Q14766 1721 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 CTR9Q6PD62 1173 aa25.42■■□□□ 1.66
CNEP1R1-202ENST00000427478 ERICH2A1L162 156 aa25.41■■□□□ 1.66
CNEP1R1-202ENST00000427478 CDKL5O76039 1030 aa25.41■■□□□ 1.66
CNEP1R1-202ENST00000427478 CFAP45Q9UL16 551 aa25.41■■□□□ 1.66
CNEP1R1-202ENST00000427478 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 USP17L21D6R901 530 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 TMED8Q6PL24 325 aaPredicted RBP25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 CPLX2Q6PUV4 134 aaKnown RBP25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 ESR2Q92731 530 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 DCP1AQ9NPI6 582 aaPredicted RBP25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 CEBPZQ03701 1054 aaKnown RBP25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 GRIK5Q16478 980 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 SYNE3Q6ZMZ3 975 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 PHKBQ93100 1093 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 UBAC1Q9BSL1 405 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 CD209Q9NNX6 404 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 GJB4Q9NTQ9 266 aa25.4■■□□□ 1.66
CNEP1R1-202ENST00000427478 PPEF1O14829 653 aaPredicted RBP25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 FBXO18Q8NFZ0 1043 aa25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 MTA3Q9BTC8 594 aa25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 FAM217BQ9NTX9 383 aaPredicted RBP25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 PODXL2Q9NZ53 605 aa25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 POLLQ9UGP5 575 aa25.39■■□□□ 1.66
CNEP1R1-202ENST00000427478 COL11A2P13942 1736 aaPredicted RBP25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 GOLGA6L4A6NEF3 574 aa25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 EVX2Q03828 476 aa25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 TBC1D16Q8TBP0 767 aa25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 FTOQ9C0B1 505 aaKnown RBP eCLIP25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 TSPY26PQ9H489 355 aa25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 ATP8A2Q9NTI2 1148 aa25.39■■□□□ 1.65
CNEP1R1-202ENST00000427478 NTRK3Q16288 839 aa25.38■■□□□ 1.65
CNEP1R1-202ENST00000427478 PRDM1O75626 825 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 DLEC1Q9Y238 1755 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 NID2Q14112 1375 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 TNKSO95271 1327 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 C6orf229H3BNL8 230 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 LIG1P18858 919 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 DIXDC1Q155Q3 683 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 FLAD1Q8NFF5 587 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 PGBD1Q96JS3 809 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 AIFM3Q96NN9 605 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 ALG1Q9BT22 464 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 RGPD3A6NKT7 1758 aaPredicted RBP25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 RGPD4Q7Z3J3 1758 aa25.37■■□□□ 1.65
CNEP1R1-202ENST00000427478 RANBP6O60518 1105 aaKnown RBP25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 MMP10P09238 476 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 IARSP41252 1262 aaKnown RBP25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 ZNF396Q96N95 335 aaPredicted RBP25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 USP28Q96RU2 1077 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 TAOK2Q9UL54 1235 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 NAV1Q8NEY1 1877 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 LETM1O95202 739 aaPredicted RBP25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 IL1R1P14778 569 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 GSTO1P78417 241 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 MSL1Q68DK7 614 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 TMC4Q7Z404 712 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 TMTC2Q8N394 836 aa25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 ARPP21Q9UBL0 812 aaPredicted RBP25.36■■□□□ 1.65
CNEP1R1-202ENST00000427478 CYP2D6P10635 497 aa25.35■■□□□ 1.65
CNEP1R1-202ENST00000427478 SEC23AQ15436 765 aa25.35■■□□□ 1.65
CNEP1R1-202ENST00000427478 SP8Q8IXZ3 490 aa25.35■■□□□ 1.65
CNEP1R1-202ENST00000427478 PCP11498 1178 aaKnown RBP25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 RTN1Q16799 776 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 ZNF654Q8IZM8 581 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 BICD2Q8TD16 824 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 PARP3Q9Y6F1 533 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 IGSF3O75054 1194 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 FGRP09769 529 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 SRGNP10124 158 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 ATL3Q6DD88 541 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 SH3RF3Q8TEJ3 882 aaPredicted RBP25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 ZSCAN10Q96SZ4 725 aaPredicted RBP25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 SLC26A6Q9BXS9 759 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 CDK5RAP2Q96SN8 1893 aa25.34■■□□□ 1.65
CNEP1R1-202ENST00000427478 SLC4A8Q2Y0W8 1093 aa25.33■■□□□ 1.65
CNEP1R1-202ENST00000427478 RNF214Q8ND24 703 aa25.33■■□□□ 1.65
CNEP1R1-202ENST00000427478 NUP133Q8WUM0 1156 aa25.33■■□□□ 1.65
CNEP1R1-202ENST00000427478 ATP6V0A2Q9Y487 856 aa25.33■■□□□ 1.65
CNEP1R1-202ENST00000427478 USP5P45974 858 aa25.33■■□□□ 1.64
CNEP1R1-202ENST00000427478 ENAHQ8N8S7 591 aaPredicted RBP25.33■■□□□ 1.64
CNEP1R1-202ENST00000427478 MCM9Q9NXL9 1143 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms