RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MYH7P12883 1935 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 ERICH2A1L162 156 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 CDKL5O76039 1030 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 LRMPQ12912 555 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 NTRK3Q16288 839 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 FMR1NBQ8N0W7 255 aaPredicted RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
UBR4-207ENST00000425413 ADALQ6DHV7 355 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 TXNRD3Q86VQ6 643 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 KRT23Q9C075 422 aa13.42□□□□□ -0.26
UBR4-207ENST00000425413 NOLC1Q14978 699 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBR4-207ENST00000425413 SART3Q15020 963 aaKnown RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 STX1AQ16623 288 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 RTN1Q16799 776 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 CNNM2Q9H8M5 875 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 ZRSR1Q15695 479 aaKnown RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 ZNF384Q8TF68 577 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 GPR101Q96P66 508 aaPredicted RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 AATFQ9NY61 560 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBR4-207ENST00000425413 FAM13BQ9NYF5 915 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 USP21Q9UK80 565 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 MROH7-TTC4A0A0A0MT08 1334 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
UBR4-207ENST00000425413 ZNF75DP51815 510 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 ARID3AQ99856 593 aa13.41□□□□□ -0.26
UBR4-207ENST00000425413 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 UQCRHP07919 91 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 PFKFB1P16118 471 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 GNAT2P19087 354 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 PRDX5P30044 214 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
UBR4-207ENST00000425413 RRP9O43818 475 aaKnown RBP13.4□□□□□ -0.26
UBR4-207ENST00000425413 ZNF202O95125 648 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 YEATS4O95619 227 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
UBR4-207ENST00000425413 STAG1Q8WVM7 1258 aa13.4□□□□□ -0.26
UBR4-207ENST00000425413 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
UBR4-207ENST00000425413 TNKSO95271 1327 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 LRP5O75197 1615 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 LTBP4Q8N2S1 1624 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 USP17L21D6R901 530 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 CTAGE5O15320 804 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 LIFRP42702 1097 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 NR5A1Q13285 461 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 IQCB1Q15051 598 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 VPS72Q15906 364 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 ZNF654Q8IZM8 581 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 NMT2O60551 498 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 AXDND1Q5T1B0 1012 aaPredicted RBP13.39□□□□□ -0.27
UBR4-207ENST00000425413 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
UBR4-207ENST00000425413 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
UBR4-207ENST00000425413 CYP2D6P10635 497 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 MECOMQ03112 1051 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 DIS3L2Q8IYB7 885 aaKnown RBP13.38□□□□□ -0.27
UBR4-207ENST00000425413 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
UBR4-207ENST00000425413 ANO10Q9NW15 660 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
UBR4-207ENST00000425413 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
UBR4-207ENST00000425413 HIBADHP31937 336 aaKnown RBP13.38□□□□□ -0.27
UBR4-207ENST00000425413 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 FILIP1Q7Z7B0 1213 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
UBR4-207ENST00000425413 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 RFC4P35249 363 aa13.38□□□□□ -0.27
UBR4-207ENST00000425413 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms