RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 WNT10BO00744 389 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 BAG3O95817 575 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 PRMT6Q96LA8 375 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 POTECB2RU33 542 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 FOXP2O15409 715 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 CERS3Q8IU89 383 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
ACTN4-203ENST00000424234 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
ACTN4-203ENST00000424234 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
ACTN4-203ENST00000424234 PLCG2P16885 1265 aa16.71■□□□□ 0.27
ACTN4-203ENST00000424234 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
ACTN4-203ENST00000424234 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
ACTN4-203ENST00000424234 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
ACTN4-203ENST00000424234 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
ACTN4-203ENST00000424234 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
ACTN4-203ENST00000424234 EPHX2P34913 555 aa16.7■□□□□ 0.26
ACTN4-203ENST00000424234 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
ACTN4-203ENST00000424234 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
ACTN4-203ENST00000424234 TEX11Q8IYF3 940 aa16.7■□□□□ 0.26
ACTN4-203ENST00000424234 PAPPA2Q9BXP8 1791 aa16.7■□□□□ 0.26
ACTN4-203ENST00000424234 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-203ENST00000424234 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 PRKAB2O43741 272 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-203ENST00000424234 SDR42E1Q8WUS8 393 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
ACTN4-203ENST00000424234 EPB41L4AQ9HCS5 686 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-203ENST00000424234 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 SLC4A4Q9Y6R1 1079 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 FLT1P17948 1338 aa16.69■□□□□ 0.26
ACTN4-203ENST00000424234 HSPD1P10809 573 aaKnown RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 GNAT2P19087 354 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 MRE11P49959 708 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 CACNB3P54284 484 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 TAF1DQ9H5J8 278 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 RPAP1Q9BWH6 1393 aaPredicted RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 GSG1L2A8MUP6 293 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 MYO1BO43795 1136 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 PTH1RQ03431 593 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 NFIAQ12857 509 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 KLHL40Q2TBA0 621 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 TGFBRAP1Q8WUH2 860 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 DDX4Q9NQI0 724 aaKnown RBP16.68■□□□□ 0.26
ACTN4-203ENST00000424234 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
ACTN4-203ENST00000424234 ZMYM6O95789 1325 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-203ENST00000424234 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-203ENST00000424234 ZNF526Q8TF50 670 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-203ENST00000424234 DSCC1Q9BVC3 393 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 IDI2Q9BXS1 227 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 NMRK2Q9NPI5 230 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
ACTN4-203ENST00000424234 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
ACTN4-203ENST00000424234 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 DOCK1Q14185 1865 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 USP5P45974 858 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 PICALMQ13492 652 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 MAPKAPK5Q8IW41 473 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
ACTN4-203ENST00000424234 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
ACTN4-203ENST00000424234 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
ACTN4-203ENST00000424234 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.268e-6■■□□□ 13.6
ACTN4-203ENST00000424234 PKP1Q13835 747 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 FKBP1CQ5VVH2 108 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
ACTN4-203ENST00000424234 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
ACTN4-203ENST00000424234 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 VEGFAP15692 232 aaPredicted RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 KCNB2Q92953 911 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 ZDHHC9Q9Y397 364 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 BRD1O95696 1058 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 APPP05067 770 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 TDO2P48775 406 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 ALX1Q15699 326 aa16.64■□□□□ 0.25
ACTN4-203ENST00000424234 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 PNMA8AQ86V59 439 aaPredicted RBP16.64■□□□□ 0.25
ACTN4-203ENST00000424234 MAP4K1Q92918 833 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms