RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 LY9Q9HBG7 655 aa13.47□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 IKBKBO14920 756 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 CCZ1BP86790 482 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 CCZ1P86791 482 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 PNOCQ13519 176 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 RASGRF1Q13972 1273 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 ALX1Q15699 326 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 INCENPQ9NQS7 918 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 SMAP1Q8IYB5 467 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 DIS3L2Q8IYB7 885 aaKnown RBP13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 VGLL2Q8N8G2 317 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 NBPF3Q9H094 633 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
CSPG4P3Y-201ENST00000418188 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SYCP1Q15431 976 aa13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 GNL3LQ9NVN8 582 aaKnown RBP13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 RAI14Q9P0K7 980 aa13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CEP131Q9UPN4 1083 aa13.46□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SNAP23O00161 211 aa13.45□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 U2AF2P26368 475 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 AK7Q96M32 723 aa13.45□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 BTBD18B2RXH4 712 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 IFNAR1P17181 557 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SHC4Q6S5L8 630 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MROH7-TTC4A0A0A0MT08 1334 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 GLI3P10071 1580 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CYP7A1P22680 504 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 LAMA4Q16363 1823 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FEZ1Q99689 392 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 KCNJ14Q9UNX9 436 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 DEXIO95424 95 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FMNL1O95466 1100 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 BCAMP50895 628 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SPECC1Q5M775 1068 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PDILTQ8N807 584 aa13.44□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZNF335Q9H4Z2 1342 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NPHP1O15259 732 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 RESP18Q5W5W9 173 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 KRBA2Q6ZNG9 492 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NIP7Q9Y221 180 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 TJP1Q07157 1748 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 TCRBV5S4A2TA0A5A2 114 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PRKAB2O43741 272 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SLU7O95391 586 aaKnown RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ESR2Q92731 530 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZNF215Q9UL58 517 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 V9GYY5 206 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 STK36Q9NRP7 1315 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 RANBP6O60518 1105 aaKnown RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NYAP1Q6ZVC0 841 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SMARCE1Q969G3 411 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 EPB41L4AQ9HCS5 686 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PCDHA5Q9Y5H7 936 aa13.43□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SYT10Q6XYQ8 523 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 LCORLQ8N3X6 602 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ERO1AQ96HE7 468 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ATRNO75882 1429 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 GSG1L2A8MUP6 293 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MMP1P03956 469 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 TUBB4AP04350 444 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PTPAQ15257 358 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NTRK3Q16288 839 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 HSP90AA4PQ58FG1 418 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 SLC4A9Q96Q91 983 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 POLR2DO15514 142 aaKnown RBP13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 FGFR2P21802 821 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 CMTR1Q8N1G2 835 aaKnown RBP13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 MYO1BO43795 1136 aa13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NAA30Q147X3 362 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P3Y-201ENST00000418188 NCAPHQ15003 741 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms