RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
TTC38-202ENST00000417709 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
TTC38-202ENST00000417709 SIL1Q9H173 461 aa17.75■□□□□ 0.43
TTC38-202ENST00000417709 PRO3102Q9H379 93 aa17.75■□□□□ 0.43
TTC38-202ENST00000417709 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
TTC38-202ENST00000417709 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
TTC38-202ENST00000417709 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
TTC38-202ENST00000417709 PTPRAP18433 802 aa17.74■□□□□ 0.43
TTC38-202ENST00000417709 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
TTC38-202ENST00000417709 RGS3P49796 1198 aa17.74■□□□□ 0.43
TTC38-202ENST00000417709 ATG9AQ7Z3C6 839 aa17.74■□□□□ 0.43
TTC38-202ENST00000417709 AFG3L2Q9Y4W6 797 aa17.74■□□□□ 0.43
TTC38-202ENST00000417709 LRRFIP2Q9Y608 721 aaKnown RBP17.74■□□□□ 0.43
TTC38-202ENST00000417709 A0A0G2JLL6 359 aaPredicted RBP17.73■□□□□ 0.43
TTC38-202ENST00000417709 INHAP05111 366 aa17.73■□□□□ 0.43
TTC38-202ENST00000417709 PRRT2Q7Z6L0 340 aaPredicted RBP17.73■□□□□ 0.43
TTC38-202ENST00000417709 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
TTC38-202ENST00000417709 CEP126Q9P2H0 1117 aa17.73■□□□□ 0.43
TTC38-202ENST00000417709 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
TTC38-202ENST00000417709 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
TTC38-202ENST00000417709 SMCR8Q8TEV9 937 aaPredicted RBP17.72■□□□□ 0.43
TTC38-202ENST00000417709 MYH2Q9UKX2 1941 aa17.72■□□□□ 0.43
TTC38-202ENST00000417709 TRIM75PA6NK02 468 aa17.71■□□□□ 0.43
TTC38-202ENST00000417709 SOX1O00570 391 aaPredicted RBP17.71■□□□□ 0.43
TTC38-202ENST00000417709 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
TTC38-202ENST00000417709 PXYLP1Q8TE99 480 aa17.71■□□□□ 0.43
TTC38-202ENST00000417709 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
TTC38-202ENST00000417709 PAWRQ96IZ0 340 aaKnown RBP17.71■□□□□ 0.43
TTC38-202ENST00000417709 ANP32CO43423 234 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 ENTPD3O75355 529 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 PHKA1P46020 1223 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 CCDC84Q86UT8 332 aaPredicted RBP17.7■□□□□ 0.42
TTC38-202ENST00000417709 ANKRD13CQ8N6S4 541 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 COA7Q96BR5 231 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.7■□□□□ 0.42
TTC38-202ENST00000417709 DENND2AQ9ULE3 1009 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 PTPRCP08575 1304 aa17.7■□□□□ 0.42
TTC38-202ENST00000417709 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
TTC38-202ENST00000417709 CTNND1O60716 968 aaKnown RBP17.69■□□□□ 0.42
TTC38-202ENST00000417709 PICALMQ13492 652 aa17.69■□□□□ 0.42
TTC38-202ENST00000417709 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
TTC38-202ENST00000417709 ABCF2Q9UG63 623 aa17.69■□□□□ 0.42
TTC38-202ENST00000417709 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
TTC38-202ENST00000417709 LAMA2P24043 3122 aaKnown RBP17.69■□□□□ 0.42
TTC38-202ENST00000417709 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
TTC38-202ENST00000417709 IRF5Q13568 498 aa17.68■□□□□ 0.42
TTC38-202ENST00000417709 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
TTC38-202ENST00000417709 ADORA1P30542 326 aa17.67■□□□□ 0.42
TTC38-202ENST00000417709 TIMM10P62072 90 aa17.67■□□□□ 0.42
TTC38-202ENST00000417709 TREML2Q5T2D2 321 aa17.67■□□□□ 0.42
TTC38-202ENST00000417709 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
TTC38-202ENST00000417709 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
TTC38-202ENST00000417709 PAK6Q9NQU5 681 aaPredicted RBP17.67■□□□□ 0.42
TTC38-202ENST00000417709 SALL1Q9NSC2 1324 aa17.67■□□□□ 0.42
TTC38-202ENST00000417709 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
TTC38-202ENST00000417709 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
TTC38-202ENST00000417709 SEMA3EO15041 775 aa17.66■□□□□ 0.42
TTC38-202ENST00000417709 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
TTC38-202ENST00000417709 DZIP1Q86YF9 867 aaKnown RBP17.66■□□□□ 0.42
TTC38-202ENST00000417709 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
TTC38-202ENST00000417709 CRISPLD2Q9H0B8 497 aa17.66■□□□□ 0.42
TTC38-202ENST00000417709 PA2G4Q9UQ80 394 aaKnown RBP17.66■□□□□ 0.42
TTC38-202ENST00000417709 PTPRFP10586 1907 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 FAM196BA6NMK8 535 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 CIAO1O76071 339 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 CAPN2P17655 700 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 SPP2Q13103 211 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
TTC38-202ENST00000417709 ZMYND8Q9ULU4 1186 aaPredicted RBP17.65■□□□□ 0.42
TTC38-202ENST00000417709 AGTPBP1Q9UPW5 1226 aa17.65■□□□□ 0.42
TTC38-202ENST00000417709 PHIPQ8WWQ0 1821 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 DOCK2Q92608 1830 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
TTC38-202ENST00000417709 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.41
TTC38-202ENST00000417709 BTDP43251 543 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 SPTY2D1Q68D10 685 aaPredicted RBP17.64■□□□□ 0.41
TTC38-202ENST00000417709 C7orf61Q8IZ16 206 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 FAM163AQ96GL9 167 aaPredicted RBP17.64■□□□□ 0.41
TTC38-202ENST00000417709 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.64■□□□□ 0.41
TTC38-202ENST00000417709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.64■□□□□ 0.41
TTC38-202ENST00000417709 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 GAKO14976 1311 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 UNC80Q8N2C7 3258 aa17.64■□□□□ 0.41
TTC38-202ENST00000417709 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
TTC38-202ENST00000417709 TRIM32Q13049 653 aa17.63■□□□□ 0.41
TTC38-202ENST00000417709 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
TTC38-202ENST00000417709 SYN1P17600 705 aa17.62■□□□□ 0.41
TTC38-202ENST00000417709 RASGRF1Q13972 1273 aa17.62■□□□□ 0.41
TTC38-202ENST00000417709 GDF15Q99988 308 aa17.62■□□□□ 0.41
TTC38-202ENST00000417709 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
TTC38-202ENST00000417709 GJD2Q9UKL4 321 aa17.62■□□□□ 0.41
TTC38-202ENST00000417709 TBC1D12O60347 775 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 GCLCP48506 637 aaPredicted RBP17.61■□□□□ 0.41
TTC38-202ENST00000417709 HMGCS2P54868 508 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 MECOMQ03112 1051 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
TTC38-202ENST00000417709 DEFB123Q8N688 67 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms