RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ECE1P42892 770 aa27.88■■■□□ 2.05
SMARCB1-205ENST00000417137 IREB2P48200 963 aaKnown RBP27.88■■■□□ 2.05
SMARCB1-205ENST00000417137 DCAF15Q66K64 600 aa27.88■■■□□ 2.05
SMARCB1-205ENST00000417137 EVI5LQ96CN4 794 aa27.88■■■□□ 2.05
SMARCB1-205ENST00000417137 DDX4Q9NQI0 724 aaKnown RBP27.88■■■□□ 2.05
SMARCB1-205ENST00000417137 UNCXA6NJT0 531 aa27.87■■■□□ 2.05
SMARCB1-205ENST00000417137 UBE2Q2LH0YL09 131 aa27.87■■■□□ 2.05
SMARCB1-205ENST00000417137 MAP3K11Q16584 847 aa27.87■■■□□ 2.05
SMARCB1-205ENST00000417137 TGFBRAP1Q8WUH2 860 aa27.87■■■□□ 2.05
SMARCB1-205ENST00000417137 FSD1Q9BTV5 496 aa27.87■■■□□ 2.05
SMARCB1-205ENST00000417137 RFX7Q2KHR2 1363 aa27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 DOCK2Q92608 1830 aa27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 RNF113AO15541 343 aaKnown RBP27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 RGMBQ6NW40 437 aa27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 MOB2Q70IA6 237 aa27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 ZFPM1Q8IX07 1006 aa27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 RIOK1Q9BRS2 568 aaKnown RBP27.86■■■□□ 2.05
SMARCB1-205ENST00000417137 USP2O75604 605 aaPredicted RBP27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 USP5P45974 858 aa27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 CDAN1Q8IWY9 1227 aa27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 CCDC102AQ96A19 550 aa27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 CSRNP1Q96S65 589 aa27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 CRNKL1Q9BZJ0 848 aaKnown RBP27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 OSBPL5Q9H0X9 879 aaPredicted RBP27.85■■■□□ 2.05
SMARCB1-205ENST00000417137 PAPPA2Q9BXP8 1791 aa27.84■■■□□ 2.05
SMARCB1-205ENST00000417137 ZNF157P51786 506 aaPredicted RBP27.84■■■□□ 2.05
SMARCB1-205ENST00000417137 TICAM2Q86XR7 235 aa27.84■■■□□ 2.05
SMARCB1-205ENST00000417137 DHX36Q9H2U1 1008 aaKnown RBP27.84■■■□□ 2.05
SMARCB1-205ENST00000417137 MYO5AQ9Y4I1 1855 aaKnown RBP27.84■■■□□ 2.05
SMARCB1-205ENST00000417137 TRIM6-TRIM34B2RNG4 842 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 VEGFBP49765 207 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 LDLRAD1Q5T700 205 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 MAPKAPK5Q8IW41 473 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 AIDAQ96BJ3 306 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 CAPNS2Q96L46 248 aa27.83■■■□□ 2.05
SMARCB1-205ENST00000417137 SSC5DA1L4H1 1573 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 CAPN15O75808 1086 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 CYP4F22Q6NT55 531 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 ANKRD13AQ8IZ07 590 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 APPBP2Q92624 585 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 ZNF341Q9BYN7 854 aa27.82■■■□□ 2.04
SMARCB1-205ENST00000417137 DDTLA6NHG4 134 aaPredicted RBP27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 PDE4AP27815 886 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 MAP3K9P80192 1104 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 GRM1Q13255 1194 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 SLFNL1Q499Z3 407 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 MIGA2Q7L4E1 593 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 SH3BP5LQ7L8J4 393 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 FZD1Q9UP38 647 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 FLT1P17948 1338 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 WDR33Q9C0J8 1336 aaKnown RBP27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 ATRNL1Q5VV63 1379 aa27.81■■■□□ 2.04
SMARCB1-205ENST00000417137 MBD4O95243 580 aa27.8■■■□□ 2.04
SMARCB1-205ENST00000417137 LCORLQ8N3X6 602 aa27.8■■■□□ 2.04
SMARCB1-205ENST00000417137 RILPL2Q969X0 211 aa27.8■■■□□ 2.04
SMARCB1-205ENST00000417137 SLC10A4Q96EP9 437 aa27.8■■■□□ 2.04
SMARCB1-205ENST00000417137 ARMT1Q9H993 441 aa27.8■■■□□ 2.04
SMARCB1-205ENST00000417137 COL2A1P02458 1487 aaPredicted RBP27.79■■■□□ 2.04
SMARCB1-205ENST00000417137 PUS7LQ9H0K6 701 aaKnown RBP27.79■■■□□ 2.04
SMARCB1-205ENST00000417137 PI4KBQ9UBF8 816 aa27.79■■■□□ 2.04
SMARCB1-205ENST00000417137 CHGBP05060 677 aa27.78■■■□□ 2.04
SMARCB1-205ENST00000417137 DDRGK1Q96HY6 314 aa27.78■■■□□ 2.04
SMARCB1-205ENST00000417137 PPP4R2Q9NY27 417 aa27.78■■■□□ 2.04
SMARCB1-205ENST00000417137 CSADQ9Y600 493 aa27.78■■■□□ 2.04
SMARCB1-205ENST00000417137 TBC1D12O60347 775 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 HLA-DOAP06340 250 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 MAP3K10Q02779 954 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 NOGQ13253 232 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 OSBP2Q969R2 916 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 WRNIP1Q96S55 665 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 ATP8A2Q9NTI2 1148 aa27.77■■■□□ 2.04
SMARCB1-205ENST00000417137 MAP2K2P36507 400 aa27.76■■■□□ 2.03
SMARCB1-205ENST00000417137 TTC6Q86TZ1 520 aa27.76■■■□□ 2.03
SMARCB1-205ENST00000417137 FOXP4Q8IVH2 680 aaPredicted RBP27.76■■■□□ 2.03
SMARCB1-205ENST00000417137 SAP30BPQ9UHR5 308 aaKnown RBP27.76■■■□□ 2.03
SMARCB1-205ENST00000417137 PALD1Q9ULE6 856 aa27.76■■■□□ 2.03
SMARCB1-205ENST00000417137 SLC10A3P09131 477 aa27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 ZMYM1Q5SVZ6 1142 aa27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 STRBPQ96SI9 672 aaKnown RBP27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 TRIM34Q9BYJ4 488 aa27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.75■■■□□ 2.032e-8■■□□□ 13.5
SMARCB1-205ENST00000417137 HERC5Q9UII4 1024 aaKnown RBP27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 ZNF112Q9UJU3 913 aa27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 SLC4A4Q9Y6R1 1079 aa27.75■■■□□ 2.03
SMARCB1-205ENST00000417137 GNAT2P19087 354 aa27.74■■■□□ 2.03
SMARCB1-205ENST00000417137 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.74■■■□□ 2.03
SMARCB1-205ENST00000417137 RASAL3Q86YV0 1011 aa27.74■■■□□ 2.03
SMARCB1-205ENST00000417137 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.74■■■□□ 2.03
SMARCB1-205ENST00000417137 FAM155AB1AL88 458 aaPredicted RBP27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 POLR3DP05423 398 aaPredicted RBP27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 TTC22Q5TAA0 569 aa27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 CRACR2BQ8N4Y2 399 aaPredicted RBP27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 SDR42E1Q8WUS8 393 aa27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 CLMNQ96JQ2 1002 aa27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 DCP1AQ9NPI6 582 aaPredicted RBP27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 MCM9Q9NXL9 1143 aa27.73■■■□□ 2.03
SMARCB1-205ENST00000417137 GPAA1O43292 621 aa27.72■■■□□ 2.03
SMARCB1-205ENST00000417137 PRKAB2O43741 272 aa27.72■■■□□ 2.03
SMARCB1-205ENST00000417137 VGLL4Q14135 290 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms