RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ARAP2Q8WZ64 1704 aa11.89□□□□□ -0.51
SOX9-AS1-201ENST00000412640 IGHMBP2P38935 993 aaKnown RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 FKBP1AP62942 108 aaKnown RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 MIGA2Q7L4E1 593 aa11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 UHRF1Q96T88 793 aaPredicted RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 TAF5LO75529 589 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 HMGCRP04035 888 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 HOXB7P09629 217 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 IL1R1P14778 569 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 PPM1EQ8WY54 764 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 COA7Q96BR5 231 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 API5Q9BZZ5 524 aaKnown RBP11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 DDX19BQ9UMR2 479 aa11.87□□□□□ -0.51
SOX9-AS1-201ENST00000412640 PTPRCP08575 1304 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 COL6A1P12109 1028 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CHRNDQ07001 517 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ASB2Q96Q27 587 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 C1QTNF1Q9BXJ1 281 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 HCN4Q9Y3Q4 1203 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CRKP46108 304 aa11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 SMAD3P84022 425 aaKnown RBP11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 GRIN2CQ14957 1233 aa11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 CHMP4BQ9H444 224 aaKnown RBP11.85□□□□□ -0.51
SOX9-AS1-201ENST00000412640 DNAH12Q6ZR08 3092 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 BDP1A6H8Y1 2624 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 NECAB3Q96P71 396 aaPredicted RBP11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 LRFN3Q9BTN0 628 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
SOX9-AS1-201ENST00000412640 DOCK3Q8IZD9 2030 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 ITGA6P23229 1130 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 DCAF15Q66K64 600 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 GADL1Q6ZQY3 521 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 SMCR8Q8TEV9 937 aaPredicted RBP11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CXCL11O14625 94 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 GRIK5Q16478 980 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 HOOK2Q96ED9 719 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
SOX9-AS1-201ENST00000412640 IGHDP01880 384 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 MRPS5P82675 430 aaKnown RBP11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 FASTKD5Q7L8L6 764 aaKnown RBP11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 TRIB2Q92519 343 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 SENP6Q9GZR1 1112 aaPredicted RBP11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 ZNF112Q9UJU3 913 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 GJD2Q9UKL4 321 aa11.81□□□□□ -0.52
SOX9-AS1-201ENST00000412640 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 FAM83AQ86UY5 434 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 ZHX2Q9Y6X8 837 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 MYH3P11055 1940 aa11.8□□□□□ -0.52
SOX9-AS1-201ENST00000412640 A0A0G2JLL6 359 aaPredicted RBP11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CYP2B6P20813 491 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CCDC85BQ15834 202 aaPredicted RBP11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 LHX8Q68G74 356 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 BADQ92934 168 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CCND3P30281 292 aaPredicted RBP11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 NOL9Q5SY16 702 aaKnown RBP11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 UBE3BQ7Z3V4 1068 aa11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
SOX9-AS1-201ENST00000412640 LTBP2Q14767 1821 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms