RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 WDR19Q8NEZ3 1342 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 COL24A1Q17RW2 1714 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 ZPR1O75312 459 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 PRPF40AO75400 957 aaKnown RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 F13A1P00488 732 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 EMP3P54852 163 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 EXOSC10Q01780 885 aaKnown RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 ANKRD18AQ8IVF6 992 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 SLF2Q8IX21 1173 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 SPATA5Q8NB90 893 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 LRRN4Q8WUT4 740 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 GTF3C6Q969F1 213 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 SYAP1Q96A49 352 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 BSDC1Q9NW68 430 aaPredicted RBP8.85□□□□□ -0.99
CXCR4-202ENST00000409817 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
CXCR4-202ENST00000409817 AFF2P51816 1311 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 E7EWF7 191 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 GPAA1O43292 621 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 CHGBP05060 677 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
CXCR4-202ENST00000409817 PHKA1P46020 1223 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 ZNF445P59923 1031 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 FGD1P98174 961 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 MAP3K12Q12852 859 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 UBE4AQ14139 1066 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 SLC9C2Q5TAH2 1124 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 Q6ZUG5 572 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 SYMPKQ92797 1274 aaKnown RBP8.84□□□□□ -0.99
CXCR4-202ENST00000409817 SETDB2Q96T68 719 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 SEC31BQ9NQW1 1179 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 GNL3LQ9NVN8 582 aaKnown RBP8.84□□□□□ -0.99
CXCR4-202ENST00000409817 TAF6LQ9Y6J9 622 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 DOCK2Q92608 1830 aa8.84□□□□□ -0.99
CXCR4-202ENST00000409817 PFKFB2O60825 505 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 IGSF3O75054 1194 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 EVCP57679 992 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 HMGN5P82970 282 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 CHRNDQ07001 517 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ALX1Q15699 326 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 LARP1BQ659C4 914 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 TMED8Q6PL24 325 aaPredicted RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 TPTE2Q6XPS3 522 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 STOX1Q6ZVD7 989 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ADAMTS19Q8TE59 1207 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ZNF274Q96GC6 653 aaPredicted RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 NLRP3Q96P20 1036 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 PUS7LQ9H0K6 701 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 MTMR6Q9Y217 621 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ZNF804BA4D1E1 1349 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 LAMA4Q16363 1823 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ZNF213O14771 459 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 IDH1O75874 414 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 FGAP02671 866 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 PDE6AP16499 860 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 GNAT2P19087 354 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ERFEQ4G0M1 354 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 NECAB1Q8N987 351 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 NCOA7Q8NI08 942 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 GLMNQ92990 594 aa8.83□□□□□ -1
CXCR4-202ENST00000409817 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 PIH1D3Q9NQM4 214 aaKnown RBP8.83□□□□□ -1
CXCR4-202ENST00000409817 CARMIL3Q8ND23 1372 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 PDS5AQ29RF7 1337 aaKnown RBP8.82□□□□□ -1
CXCR4-202ENST00000409817 ZNF532Q9HCE3 1301 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 FAM205CA6NFA0 338 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 FOXP2O15409 715 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 MCM5P33992 734 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 TRDNQ13061 729 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 RASGRF1Q13972 1273 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 PI16Q6UXB8 463 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 RALYLQ86SE5 291 aaKnown RBP8.82□□□□□ -1
CXCR4-202ENST00000409817 NBPF5PQ86XG9 351 aaPredicted RBP8.82□□□□□ -1
CXCR4-202ENST00000409817 RGS22Q8NE09 1264 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
CXCR4-202ENST00000409817 BRF1Q92994 677 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 ANKRD2Q9GZV1 360 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 GRPEL1Q9HAV7 217 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 C4BP0C0L5 1744 aa8.82□□□□□ -1
CXCR4-202ENST00000409817 PNPLA7Q6ZV29 1317 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 C6orf229H3BNL8 230 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 DHX16O60231 1041 aaKnown RBP8.81□□□□□ -1
CXCR4-202ENST00000409817 HSPA1LP34931 641 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 SLFNL1Q499Z3 407 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 CAVIN4Q5BKX8 364 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 TRAPPC3LQ5T215 181 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 FOXD4L5Q5VV16 416 aaPredicted RBP8.81□□□□□ -1
CXCR4-202ENST00000409817 CAVIN1Q6NZI2 390 aaKnown RBP8.81□□□□□ -1
CXCR4-202ENST00000409817 SEPT12Q8IYM1 358 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 SMARCC2Q8TAQ2 1214 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 GPT2Q8TD30 523 aa8.81□□□□□ -1
CXCR4-202ENST00000409817 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms