RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 FBXO31Q5XUX0 539 aaPredicted RBP13.45□□□□□ -0.26
SMCR8-201ENST00000406438 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 GKAP1Q5VSY0 366 aaPredicted RBP13.45□□□□□ -0.26
SMCR8-201ENST00000406438 PPFIBP2Q8ND30 876 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 PLIN2Q99541 437 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 LETM2Q2VYF4 491 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 TNRQ92752 1358 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 IGHDP01880 384 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 CYP26C1Q6V0L0 522 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 TNFAIP3P21580 790 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 MYO10Q9HD67 2058 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 ZBTB24O43167 697 aaPredicted RBP13.44□□□□□ -0.26
SMCR8-201ENST00000406438 NEDD9Q14511 834 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 ASIC2Q16515 512 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 RSPH3Q86UC2 560 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 VCXQ9H320 206 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
SMCR8-201ENST00000406438 MAP3K5Q99683 1374 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 SNX21Q969T3 373 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 BEGAINQ9BUH8 593 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 ATP2A3Q93084 1043 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 SAP30BPQ9UHR5 308 aaKnown RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 HMGB1P1B2RPK0 211 aaPredicted RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 IFT20Q8IY31 132 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 BICC1Q9H694 974 aaKnown RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 CFAP43Q8NDM7 1665 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 CEP120Q8N960 986 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 GPCPD1Q9NPB8 672 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 PTPDC1A2A3K4 754 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 BCRP11274 1271 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 HPDP32754 393 aaPredicted RBP13.43□□□□□ -0.26
SMCR8-201ENST00000406438 AK2P54819 239 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 MAP7Q14244 749 aa13.43□□□□□ -0.26
SMCR8-201ENST00000406438 A6NNZ2 444 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 TUBB8Q3ZCM7 444 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PKD2L1Q9P0L9 805 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 I3L4J1 428 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 ZNF365Q70YC5 407 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 MIPOL1Q8TD10 442 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 GJA3Q9Y6H8 435 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 IVNS1ABPQ9Y6Y0 642 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 UBAP1LF5GYI3 381 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 TEX11Q8IYF3 940 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 M0QZ92 97 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CETN3O15182 167 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CHMP2AO43633 222 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 RXRAP19793 462 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 ARHGEF35A5YM69 484 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 LPXNO60711 386 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 FEZ2Q9UHY8 353 aaPredicted RBP13.42□□□□□ -0.26
SMCR8-201ENST00000406438 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PCDH11XQ9BZA7 1347 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PCDH11YQ9BZA8 1340 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 PLCH2O75038 1416 aa13.42□□□□□ -0.26
SMCR8-201ENST00000406438 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 CASQ2O14958 399 aaPredicted RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 MYL5Q02045 173 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 TBC1D8BQ0IIM8 1120 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 TFCP2Q12800 502 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
SMCR8-201ENST00000406438 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 POLR2DO15514 142 aaKnown RBP13.41□□□□□ -0.26
SMCR8-201ENST00000406438 LGSNQ5TDP6 509 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms