RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GIMAP6Q6P9H5 292 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 AGBL3Q8NEM8 1001 aa24.88■■□□□ 1.57
TPM1-208ENST00000404484 CIZ1Q9ULV3 898 aaPredicted RBP24.88■■□□□ 1.57
TPM1-208ENST00000404484 CUL4AQ13619 759 aa24.87■■□□□ 1.57
TPM1-208ENST00000404484 MAP1SQ66K74 1059 aaPredicted RBP24.87■■□□□ 1.57
TPM1-208ENST00000404484 STOX1Q6ZVD7 989 aa24.87■■□□□ 1.57
TPM1-208ENST00000404484 DHX32Q7L7V1 743 aaKnown RBP24.87■■□□□ 1.57
TPM1-208ENST00000404484 SAMD7Q7Z3H4 446 aa24.87■■□□□ 1.57
TPM1-208ENST00000404484 TRPM4Q8TD43 1214 aa24.87■■□□□ 1.57
TPM1-208ENST00000404484 FBXW7Q969H0 707 aa24.87■■□□□ 1.57
TPM1-208ENST00000404484 CRNKL1Q9BZJ0 848 aaKnown RBP24.87■■□□□ 1.57
TPM1-208ENST00000404484 SH2B1Q9NRF2 756 aaPredicted RBP24.87■■□□□ 1.57
TPM1-208ENST00000404484 BAG3O95817 575 aa24.86■■□□□ 1.57
TPM1-208ENST00000404484 GTF2IP78347 998 aa24.86■■□□□ 1.57
TPM1-208ENST00000404484 INTS4Q96HW7 963 aaKnown RBP24.86■■□□□ 1.57
TPM1-208ENST00000404484 CWC22Q9HCG8 908 aaKnown RBP24.86■■□□□ 1.57
TPM1-208ENST00000404484 EPB41L4AQ9HCS5 686 aaPredicted RBP24.86■■□□□ 1.57
TPM1-208ENST00000404484 CHMP5Q9NZZ3 219 aa24.86■■□□□ 1.57
TPM1-208ENST00000404484 ITGBL1O95965 494 aaPredicted RBP24.85■■□□□ 1.57
TPM1-208ENST00000404484 EGFRP00533 1210 aa24.85■■□□□ 1.57
TPM1-208ENST00000404484 HAND2P61296 217 aa24.85■■□□□ 1.57
TPM1-208ENST00000404484 TRDNQ13061 729 aa24.85■■□□□ 1.57
TPM1-208ENST00000404484 NOL8Q76FK4 1167 aaKnown RBP24.85■■□□□ 1.57
TPM1-208ENST00000404484 RALYLQ86SE5 291 aaKnown RBP24.85■■□□□ 1.57
TPM1-208ENST00000404484 NCOA7Q8NI08 942 aa24.84■■□□□ 1.57
TPM1-208ENST00000404484 MROH7-TTC4A0A0A0MT08 1334 aa24.84■■□□□ 1.57
TPM1-208ENST00000404484 ADAMTSL1Q8N6G6 1762 aa24.84■■□□□ 1.57
TPM1-208ENST00000404484 TBC1D10BQ4KMP7 808 aaPredicted RBP24.84■■□□□ 1.57
TPM1-208ENST00000404484 AATFQ9NY61 560 aaKnown RBP eCLIP24.84■■□□□ 1.57
TPM1-208ENST00000404484 PRKAB2O43741 272 aa24.83■■□□□ 1.57
TPM1-208ENST00000404484 USP17L8P0C7I0 530 aa24.83■■□□□ 1.57
TPM1-208ENST00000404484 PPP4CP60510 307 aa24.83■■□□□ 1.57
TPM1-208ENST00000404484 DYNLL1P63167 89 aaKnown RBP24.83■■□□□ 1.57
TPM1-208ENST00000404484 RBM26Q5T8P6 1007 aaKnown RBP24.83■■□□□ 1.57
TPM1-208ENST00000404484 ATP8A2Q9NTI2 1148 aa24.83■■□□□ 1.57
TPM1-208ENST00000404484 WDR19Q8NEZ3 1342 aa24.83■■□□□ 1.56
TPM1-208ENST00000404484 PSME4Q14997 1843 aa24.82■■□□□ 1.56
TPM1-208ENST00000404484 DDIT3P35638 169 aa24.82■■□□□ 1.56
TPM1-208ENST00000404484 APLP1P51693 650 aa24.82■■□□□ 1.56
TPM1-208ENST00000404484 ZNF280AP59817 542 aaPredicted RBP24.82■■□□□ 1.56
TPM1-208ENST00000404484 FKBP1AP62942 108 aaKnown RBP24.82■■□□□ 1.56
TPM1-208ENST00000404484 FGD1P98174 961 aa24.82■■□□□ 1.56
TPM1-208ENST00000404484 FAM163AQ96GL9 167 aaPredicted RBP24.82■■□□□ 1.56
TPM1-208ENST00000404484 PGAP2Q9UHJ9 254 aa24.82■■□□□ 1.56
TPM1-208ENST00000404484 PLCG2P16885 1265 aa24.81■■□□□ 1.56
TPM1-208ENST00000404484 CNNM2Q9H8M5 875 aa24.81■■□□□ 1.56
TPM1-208ENST00000404484 MCM5P33992 734 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 HTRA3P83110 453 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 EXOSC10Q01780 885 aaKnown RBP24.8■■□□□ 1.56
TPM1-208ENST00000404484 ZC3H15Q8WU90 426 aaKnown RBP24.8■■□□□ 1.56
TPM1-208ENST00000404484 SDR42E1Q8WUS8 393 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 RNF41Q9H4P4 317 aaPredicted RBP24.8■■□□□ 1.56
TPM1-208ENST00000404484 FOXD4L1Q9NU39 408 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 PASKQ96RG2 1323 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 MYH2Q9UKX2 1941 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 GRIK5Q16478 980 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 Q6ZUG5 572 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 FBXL16Q8N461 479 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 CERS5Q8N5B7 392 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 ANAPC4Q9UJX5 808 aa24.8■■□□□ 1.56
TPM1-208ENST00000404484 TOB2Q14106 344 aaPredicted RBP24.79■■□□□ 1.56
TPM1-208ENST00000404484 DIXDC1Q155Q3 683 aa24.79■■□□□ 1.56
TPM1-208ENST00000404484 KIF4BQ2VIQ3 1234 aa24.79■■□□□ 1.56
TPM1-208ENST00000404484 TBC1D10CQ8IV04 446 aa24.79■■□□□ 1.56
TPM1-208ENST00000404484 MB21D2Q8IYB1 491 aaPredicted RBP24.79■■□□□ 1.56
TPM1-208ENST00000404484 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.79■■□□□ 1.56
TPM1-208ENST00000404484 GAKO14976 1311 aa24.79■■□□□ 1.56
TPM1-208ENST00000404484 MYO3BQ8WXR4 1341 aa24.79■■□□□ 1.56
TPM1-208ENST00000404484 GPR75-ASB3A0A0A6YYF3 556 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 PCP11498 1178 aaKnown RBP24.78■■□□□ 1.56
TPM1-208ENST00000404484 AKNAD1Q5T1N1 836 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 STAG1Q8WVM7 1258 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 TCEANC2Q96MN5 208 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 AGXT2Q9BYV1 514 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 KRT23Q9C075 422 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 NBPF3Q9H094 633 aa24.78■■□□□ 1.56
TPM1-208ENST00000404484 PPARAQ07869 468 aa24.77■■□□□ 1.56
TPM1-208ENST00000404484 MFSD6Q6ZSS7 791 aa24.77■■□□□ 1.56
TPM1-208ENST00000404484 KIAA0825Q8IV33 1275 aa24.77■■□□□ 1.56
TPM1-208ENST00000404484 MYOZ2Q9NPC6 264 aa24.77■■□□□ 1.56
TPM1-208ENST00000404484 ARPP21Q9UBL0 812 aaPredicted RBP24.77■■□□□ 1.56
TPM1-208ENST00000404484 ZNF646O15015 1829 aaPredicted RBP24.77■■□□□ 1.56
TPM1-208ENST00000404484 FMR1Q06787 632 aaKnown RBP eCLIP24.76■■□□□ 1.55
TPM1-208ENST00000404484 OGFOD1Q8N543 542 aa24.76■■□□□ 1.55
TPM1-208ENST00000404484 TPCN1Q9ULQ1 816 aa24.76■■□□□ 1.55
TPM1-208ENST00000404484 BTDP43251 543 aa24.76■■□□□ 1.55
TPM1-208ENST00000404484 COL9A3Q14050 684 aaPredicted RBP24.76■■□□□ 1.55
TPM1-208ENST00000404484 CHMP4CQ96CF2 233 aa24.76■■□□□ 1.55
TPM1-208ENST00000404484 DCP1AQ9NPI6 582 aaPredicted RBP24.76■■□□□ 1.55
TPM1-208ENST00000404484 TRAF5O00463 557 aa24.75■■□□□ 1.55
TPM1-208ENST00000404484 PRC1O43663 620 aa24.75■■□□□ 1.55
TPM1-208ENST00000404484 SLC3A2P08195 630 aaKnown RBP24.75■■□□□ 1.55
TPM1-208ENST00000404484 USP5P45974 858 aa24.75■■□□□ 1.55
TPM1-208ENST00000404484 SBK1Q52WX2 424 aa24.75■■□□□ 1.55
TPM1-208ENST00000404484 AMOTL1Q8IY63 956 aa24.75■■□□□ 1.55
TPM1-208ENST00000404484 TTF2Q9UNY4 1162 aaKnown RBP24.75■■□□□ 1.55
TPM1-208ENST00000404484 ASTN2O75129 1339 aaPredicted RBP24.74■■□□□ 1.55
TPM1-208ENST00000404484 MINDY4BA8MYZ0 360 aa24.74■■□□□ 1.55
TPM1-208ENST00000404484 NUCB2P80303 420 aa24.74■■□□□ 1.55
TPM1-208ENST00000404484 ME3Q16798 604 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms