RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 MAGEB6P1A0A0J9YX57 407 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 SNAP23O00161 211 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 ZPR1O75312 459 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 PCP11498 1178 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 TERF1P54274 439 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 RBM6P78332 1123 aaKnown RBP12.49□□□□□ -0.41
LINC00649-202ENST00000400353 STX1AQ16623 288 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 PTF1AQ7RTS3 328 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 ENGASEQ8NFI3 743 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
LINC00649-202ENST00000400353 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
LINC00649-202ENST00000400353 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 RAI14Q9P0K7 980 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
LINC00649-202ENST00000400353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC00649-202ENST00000400353 SPTLC2O15270 562 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 FMNL1O95466 1100 aaPredicted RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 RXRBP28702 533 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 PPARAQ07869 468 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 SNW1Q13573 536 aaKnown RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 WTAPQ15007 396 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 TPTE2Q6XPS3 522 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 BTAF1O14981 1849 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 TPM2P07951 284 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 IFNAR1P17181 557 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 NTRK3Q16288 839 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 KRT40Q6A162 431 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 KCNG1Q9UIX4 513 aa12.47□□□□□ -0.41
LINC00649-202ENST00000400353 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
LINC00649-202ENST00000400353 PRKAB2O43741 272 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 CDC27P30260 824 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 GYG1P46976 350 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 ZNF165P49910 485 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
LINC00649-202ENST00000400353 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 FMR1NBQ8N0W7 255 aaPredicted RBP12.46□□□□□ -0.41
LINC00649-202ENST00000400353 ESR2Q92731 530 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 FAM84BQ96KN1 310 aaPredicted RBP12.46□□□□□ -0.41
LINC00649-202ENST00000400353 ABCF2Q9UG63 623 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 CLIC4Q9Y696 253 aa12.46□□□□□ -0.41
LINC00649-202ENST00000400353 COL4A1P02462 1669 aa12.46□□□□□ -0.42
LINC00649-202ENST00000400353 PPP6R2O75170 966 aa12.46□□□□□ -0.42
LINC00649-202ENST00000400353 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.42
LINC00649-202ENST00000400353 NT5C2P49902 561 aa12.46□□□□□ -0.42
LINC00649-202ENST00000400353 RTN1Q16799 776 aa12.46□□□□□ -0.42
LINC00649-202ENST00000400353 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.42
LINC00649-202ENST00000400353 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.42
LINC00649-202ENST00000400353 CCNL1Q9UK58 526 aaPredicted RBP12.46□□□□□ -0.42
LINC00649-202ENST00000400353 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 GNPATO15228 680 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 CMA1P23946 247 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 SLC39A14Q15043 492 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 LUZP1Q86V48 1076 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 MIGA1Q8NAN2 632 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 NAT10Q9H0A0 1025 aaKnown RBP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 TOMM22Q9NS69 142 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
LINC00649-202ENST00000400353 MAST2Q6P0Q8 1798 aa12.45□□□□□ -0.42
LINC00649-202ENST00000400353 LY75O60449 1722 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 PPFIA3O75145 1194 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00649-202ENST00000400353 CDC25BP30305 580 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 RRP12Q5JTH9 1297 aaKnown RBP12.44□□□□□ -0.42
LINC00649-202ENST00000400353 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 TIGD1Q96MW7 591 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms