RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 CUTAO60888 179 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 PLCG2P16885 1265 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
LAMA3-203ENST00000399516 DPH6Q7L8W6 267 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 PPM1FP49593 454 aaPredicted RBP12.58□□□□□ -0.4
LAMA3-203ENST00000399516 CDC37L1Q7L3B6 337 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 TMTC1Q8IUR5 882 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 TBC1D8BQ0IIM8 1120 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 GCC2Q8IWJ2 1684 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 ASIC2Q16515 512 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
LAMA3-203ENST00000399516 NAP1L4Q99733 375 aaKnown RBP12.58□□□□□ -0.4
LAMA3-203ENST00000399516 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
LAMA3-203ENST00000399516 VPS16Q9H269 839 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 RUFY4Q6ZNE9 571 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 TRPM2O94759 1503 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 ZNF202O95125 648 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 ZWINTO95229 277 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 PLS1Q14651 629 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
LAMA3-203ENST00000399516 PLCB1Q9NQ66 1216 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 ODF2LQ9ULJ1 636 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 KRT5P13647 590 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 RNASE9P60153 205 aaKnown RBP12.57□□□□□ -0.4
LAMA3-203ENST00000399516 RABEP2Q9H5N1 569 aa12.57□□□□□ -0.4
LAMA3-203ENST00000399516 FEZ2Q9UHY8 353 aaPredicted RBP12.57□□□□□ -0.4
LAMA3-203ENST00000399516 CCDC65Q8IXS2 484 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 FAM169AQ9Y6X4 670 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 E7EVH7 732 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 POSTNQ15063 836 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 CALUO43852 315 aaPredicted RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 ERCC5P28715 1186 aaPredicted RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 HSPA1LP34931 641 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 ZNF131P52739 623 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 CCNT1O60563 726 aaKnown RBP12.56□□□□□ -0.4
LAMA3-203ENST00000399516 MBD4O95243 580 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 MTX1Q13505 466 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 CROCCP2Q86T23 111 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 UHRF1BP1Q6BDS2 1440 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 KRT28Q7Z3Y7 464 aa12.56□□□□□ -0.4
LAMA3-203ENST00000399516 I3L4J1 428 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 PDE4DQ08499 809 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 GMNNO75496 209 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 TRIM31Q9BZY9 425 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 F8W031 263 aaPredicted RBP12.55□□□□□ -0.4
LAMA3-203ENST00000399516 ZKSCAN3Q9BRR0 538 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
LAMA3-203ENST00000399516 POLKQ9UBT6 870 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
LAMA3-203ENST00000399516 AGTPBP1Q9UPW5 1226 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 CASQ2O14958 399 aaPredicted RBP12.55□□□□□ -0.4
LAMA3-203ENST00000399516 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
LAMA3-203ENST00000399516 RFC4P35249 363 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 BRD3Q15059 726 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 NELFBQ8WX92 580 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
LAMA3-203ENST00000399516 KRT24Q2M2I5 525 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 WDR44Q5JSH3 913 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 NFE2L3Q9Y4A8 694 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 KIF3CO14782 793 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ZBTB7BO15156 539 aaPredicted RBP12.54□□□□□ -0.4
LAMA3-203ENST00000399516 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 PLCH2O75038 1416 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ZMYM3Q14202 1370 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
LAMA3-203ENST00000399516 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
LAMA3-203ENST00000399516 TMEM87BQ96K49 555 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 TCHPQ9BT92 498 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 MAP2K2P36507 400 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
LAMA3-203ENST00000399516 SGSM2O43147 1006 aa12.54□□□□□ -0.4
LAMA3-203ENST00000399516 SNX16P57768 344 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms