RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NBPF3Q9H094 633 aa15.02■□□□□ -0
LMCD1-202ENST00000397386 USP40Q9NVE5 1235 aa15.02■□□□□ -0
LMCD1-202ENST00000397386 GOLGB1Q14789 3259 aaKnown RBP15.02■□□□□ -0
LMCD1-202ENST00000397386 WDR19Q8NEZ3 1342 aa15.02■□□□□ -0
LMCD1-202ENST00000397386 FOCADQ5VW36 1801 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 WDHD1O75717 1129 aaPredicted RBP15.02□□□□□ -0.01
LMCD1-202ENST00000397386 FGRP09769 529 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 RPS6KB1P23443 525 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 RBM5P52756 815 aaKnown RBP eCLIP15.02□□□□□ -0.01
LMCD1-202ENST00000397386 ZNF280AP59817 542 aaPredicted RBP15.02□□□□□ -0.01
LMCD1-202ENST00000397386 CFAP100Q494V2 611 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 AKNAD1Q5T1N1 836 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 DHX32Q7L7V1 743 aaKnown RBP15.02□□□□□ -0.01
LMCD1-202ENST00000397386 GPC2Q8N158 579 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 FBXL16Q8N461 479 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 IDI2Q9BXS1 227 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 MCM9Q9NXL9 1143 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 TAOK2Q9UL54 1235 aa15.02□□□□□ -0.01
LMCD1-202ENST00000397386 ZBTB12Q9Y330 459 aaPredicted RBP15.02□□□□□ -0.01
LMCD1-202ENST00000397386 FLT1P17948 1338 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 SLC3A2P08195 630 aaKnown RBP15.01□□□□□ -0.01
LMCD1-202ENST00000397386 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 DLGAP5Q15398 846 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 C12orf60Q5U649 245 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 MFSD6Q6ZSS7 791 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 RALYLQ86SE5 291 aaKnown RBP15.01□□□□□ -0.01
LMCD1-202ENST00000397386 TBC1D10CQ8IV04 446 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 KRT23Q9C075 422 aa15.01□□□□□ -0.01
LMCD1-202ENST00000397386 ROBO3Q96MS0 1386 aa15□□□□□ -0.01
LMCD1-202ENST00000397386 K7ELQ4 463 aaPredicted RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 CD2BP2O95400 341 aaKnown RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 EXOSC10Q01780 885 aaKnown RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 ANKRD1Q15327 319 aa15□□□□□ -0.01
LMCD1-202ENST00000397386 GPR162Q16538 588 aa15□□□□□ -0.01
LMCD1-202ENST00000397386 ZBED3Q96IU2 234 aaPredicted RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 MTA3Q9BTC8 594 aa15□□□□□ -0.01
LMCD1-202ENST00000397386 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
LMCD1-202ENST00000397386 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 DDX60LQ5H9U9 1706 aaKnown RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 ZC3H4Q9UPT8 1303 aaKnown RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 BAZ2AQ9UIF9 1905 aaKnown RBP15□□□□□ -0.01
LMCD1-202ENST00000397386 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 MINDY4BA8MYZ0 360 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 MCM5P33992 734 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 CTDSPL2Q05D32 466 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 FKBP1CQ5VVH2 108 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 MAPKAPK5Q8IW41 473 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-202ENST00000397386 PRMT6Q96LA8 375 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-202ENST00000397386 AGXT2Q9BYV1 514 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 LAMB1P07942 1786 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 ECM29Q5VYK3 1845 aa14.99□□□□□ -0.01
LMCD1-202ENST00000397386 ADAMTSL1Q8N6G6 1762 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 ORC4O43929 436 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 ENTPD3O75355 529 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 GMPSP49915 693 aaPredicted RBP14.98□□□□□ -0.01
LMCD1-202ENST00000397386 PDE4BQ07343 736 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 TTC6Q86TZ1 520 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 DHX36Q9H2U1 1008 aaKnown RBP14.98□□□□□ -0.01
LMCD1-202ENST00000397386 ZNF287Q9HBT7 754 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 MYOZ2Q9NPC6 264 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 TMOD2Q9NZR1 351 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 RNF181Q9P0P0 153 aa14.98□□□□□ -0.01
LMCD1-202ENST00000397386 COL2A1P02458 1487 aaPredicted RBP14.98□□□□□ -0.01
LMCD1-202ENST00000397386 MYO1BO43795 1136 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 POLR3DP05423 398 aaPredicted RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 CPA1P15085 419 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 AK2P54819 239 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 DDX4Q9NQI0 724 aaKnown RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 GJA3Q9Y6H8 435 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 NEDD4P46934 1319 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 ESR2Q92731 530 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 ZSCAN31Q96LW9 406 aaPredicted RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 CNOT7Q9UIV1 285 aaKnown RBP14.97□□□□□ -0.01
LMCD1-202ENST00000397386 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 PCDHAC2Q9Y5I4 1007 aa14.97□□□□□ -0.01
LMCD1-202ENST00000397386 CYP2D7A0A087X1C5 515 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 WNT10BO00744 389 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 NFIAQ12857 509 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 PICALMQ13492 652 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 COL9A3Q14050 684 aaPredicted RBP14.96□□□□□ -0.02
LMCD1-202ENST00000397386 MICALL2Q8IY33 904 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 TMEM87BQ96K49 555 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 EHD4Q9H223 541 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 TACC3Q9Y6A5 838 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 MYH1P12882 1939 aa14.96□□□□□ -0.02
LMCD1-202ENST00000397386 ATRNL1Q5VV63 1379 aa14.95□□□□□ -0.02
LMCD1-202ENST00000397386 B4E1Z4 1266 aa14.95□□□□□ -0.02
LMCD1-202ENST00000397386 H7C1D1 291 aa14.95□□□□□ -0.02
LMCD1-202ENST00000397386 PRC1O43663 620 aa14.95□□□□□ -0.02
LMCD1-202ENST00000397386 CYP2D6P10635 497 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms