RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
SCMH1-208ENST00000397171 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
SCMH1-208ENST00000397171 EXOC5O00471 708 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 SYF2O95926 243 aaKnown RBP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 POLR3DP05423 398 aaPredicted RBP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 FDPSP14324 419 aaKnown RBP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 HNRNPH1P31943 449 aaKnown RBP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 LIG3P49916 1009 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 SKIDA1Q1XH10 827 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCMH1-208ENST00000397171 SUFUQ9UMX1 484 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 RGPD5Q99666 1765 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 CYP27B1O15528 508 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 MYO1BO43795 1136 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 CHGBP05060 677 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 CCDC175P0C221 793 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 PHKG2P15735 406 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 CMA1P23946 247 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 HSP90AA4PQ58FG1 418 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 FAM107BQ9H098 131 aa11.23□□□□□ -0.61
SCMH1-208ENST00000397171 ZNF609O15014 1411 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 SPECC1LQ69YQ0 1117 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 XIRP1Q702N8 1843 aaKnown RBP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 AARSP49588 968 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 MNAT1P51948 309 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 PNOCQ13519 176 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 SOWAHDA6NJG2 315 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 TUBB4BP68371 445 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 PDE4BQ07343 736 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 G3BP1Q13283 466 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 MYSM1Q5VVJ2 828 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 AGXT2Q9BYV1 514 aa11.22□□□□□ -0.61
SCMH1-208ENST00000397171 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
SCMH1-208ENST00000397171 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 KIF1CO43896 1103 aaKnown RBP11.21□□□□□ -0.61
SCMH1-208ENST00000397171 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
SCMH1-208ENST00000397171 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
SCMH1-208ENST00000397171 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 OLFM4Q6UX06 510 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
SCMH1-208ENST00000397171 KIF5CO60282 957 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 SYKP43405 635 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 EXOSC10Q01780 885 aaKnown RBP11.21□□□□□ -0.62
SCMH1-208ENST00000397171 TUBB2AQ13885 445 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 RAD9BQ6WBX8 426 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 TUBB2BQ9BVA1 445 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 CDHR2Q9BYE9 1310 aa11.21□□□□□ -0.62
SCMH1-208ENST00000397171 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CDC27P30260 824 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 HSPA1LP34931 641 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 IGSF22Q8N9C0 903 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 NOA1Q8NC60 698 aaKnown RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 KDM6AO15550 1401 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 MEGF6O75095 1541 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 SHOX2O60902 331 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CCT5P48643 541 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTAGE9A4FU28 777 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 MARCKSP29966 332 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 WDR93Q6P2C0 686 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-208ENST00000397171 HPSEQ9Y251 543 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 MYH8P13535 1937 aa11.2□□□□□ -0.62
SCMH1-208ENST00000397171 HEG1Q9ULI3 1381 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 KDM3BQ7LBC6 1761 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 NEURL1BA8MQ27 555 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 TUBBP07437 444 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 BMP6P22004 513 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
SCMH1-208ENST00000397171 CABP4P57796 275 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
SCMH1-208ENST00000397171 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
SCMH1-208ENST00000397171 ZNF274Q96GC6 653 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms