RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 A0A0D9SFI3 127 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 MCMDC2Q4G0Z9 681 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 TGFBRAP1Q8WUH2 860 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 CDCA5Q96FF9 252 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 FAM227BQ96M60 508 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 STRBPQ96SI9 672 aaKnown RBP19.73■□□□□ 0.75
AP1S3-202ENST00000396653 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
AP1S3-202ENST00000396653 SIPA1L1O43166 1804 aa19.73■□□□□ 0.75
AP1S3-202ENST00000396653 CHMLP26374 656 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 USP5P45974 858 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 PICALMQ13492 652 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 TEPSINQ96N21 525 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 SEC62Q99442 399 aaKnown RBP19.72■□□□□ 0.75
AP1S3-202ENST00000396653 TMEM39BQ9GZU3 492 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 ATP8A2Q9NTI2 1148 aa19.72■□□□□ 0.75
AP1S3-202ENST00000396653 SSC5DA1L4H1 1573 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 TRAF5O00463 557 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 MFAP1P55081 439 aaKnown RBP19.71■□□□□ 0.75
AP1S3-202ENST00000396653 TCP10Q12799 353 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 SUPT20HL1Q3ZLR7 823 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 MAPKAPK5Q8IW41 473 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 HOOK2Q96ED9 719 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 MKRN1Q9UHC7 482 aaKnown RBP19.71■□□□□ 0.75
AP1S3-202ENST00000396653 SCAF8Q9UPN6 1271 aaKnown RBP19.71■□□□□ 0.75
AP1S3-202ENST00000396653 CCDC171Q6TFL3 1326 aa19.71■□□□□ 0.75
AP1S3-202ENST00000396653 NF2P35240 595 aa19.7■□□□□ 0.74
AP1S3-202ENST00000396653 GIMAP6Q6P9H5 292 aa19.7■□□□□ 0.74
AP1S3-202ENST00000396653 CWC27Q6UX04 472 aaKnown RBP19.7■□□□□ 0.74
AP1S3-202ENST00000396653 DHX36Q9H2U1 1008 aaKnown RBP19.7■□□□□ 0.74
AP1S3-202ENST00000396653 DCP1AQ9NPI6 582 aaPredicted RBP19.7■□□□□ 0.74
AP1S3-202ENST00000396653 SLC4A4Q9Y6R1 1079 aa19.7■□□□□ 0.74
AP1S3-202ENST00000396653 SDR42E1Q8WUS8 393 aa19.69■□□□□ 0.74
AP1S3-202ENST00000396653 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
AP1S3-202ENST00000396653 OTOFQ9HC10 1997 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 PRKAB2O43741 272 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 CDC45O75419 566 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 NBPF12Q5TAG4 269 aaPredicted RBP19.68■□□□□ 0.74
AP1S3-202ENST00000396653 CCDC129Q6ZRS4 1044 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 SH3BP5LQ7L8J4 393 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 ZFPM1Q8IX07 1006 aa19.68■□□□□ 0.74
AP1S3-202ENST00000396653 LAMA4Q16363 1823 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 MYH8P13535 1937 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 DDTLA6NHG4 134 aaPredicted RBP19.67■□□□□ 0.74
AP1S3-202ENST00000396653 GSG1L2A8MUP6 293 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 PATL2C9JE40 543 aaKnown RBP19.67■□□□□ 0.74
AP1S3-202ENST00000396653 FKBP1BP68106 108 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 PRAMEF18Q5VWM3 479 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 CASC1Q6TDU7 716 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 DLK2Q6UY11 383 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 ZNF589Q86UQ0 364 aaPredicted RBP19.67■□□□□ 0.74
AP1S3-202ENST00000396653 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
AP1S3-202ENST00000396653 CSRNP1Q96S65 589 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 TAOK2Q9UL54 1235 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
AP1S3-202ENST00000396653 CELF2O95319 508 aaKnown RBP19.66■□□□□ 0.74
AP1S3-202ENST00000396653 HLA-DOAP06340 250 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 FMR1Q06787 632 aaKnown RBP eCLIP19.66■□□□□ 0.74
AP1S3-202ENST00000396653 DCAF15Q66K64 600 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 CDAN1Q8IWY9 1227 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 NACAP1Q9BZK3 213 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 EPB41L4AQ9HCS5 686 aaPredicted RBP19.66■□□□□ 0.74
AP1S3-202ENST00000396653 MCM9Q9NXL9 1143 aa19.66■□□□□ 0.74
AP1S3-202ENST00000396653 ARPP21Q9UBL0 812 aaPredicted RBP19.66■□□□□ 0.74
AP1S3-202ENST00000396653 SGSM2O43147 1006 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 TBC1D12O60347 775 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 MAP3K11Q16584 847 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 IFNL3Q8IZI9 196 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 EHD4Q9H223 541 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 GBA2Q9HCG7 927 aaPredicted RBP19.65■□□□□ 0.74
AP1S3-202ENST00000396653 PI4KBQ9UBF8 816 aa19.65■□□□□ 0.74
AP1S3-202ENST00000396653 FOXP2O15409 715 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 PPP1R12BO60237 982 aaPredicted RBP19.64■□□□□ 0.73
AP1S3-202ENST00000396653 APLP1P51693 650 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 C1QTNF8P60827 252 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 ALX1Q15699 326 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 SBK1Q52WX2 424 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 CST9Q5W186 159 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 METTL16Q86W50 562 aaKnown RBP19.64■□□□□ 0.73
AP1S3-202ENST00000396653 ZNF408Q9H9D4 720 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
AP1S3-202ENST00000396653 HERC5Q9UII4 1024 aaKnown RBP19.64■□□□□ 0.73
AP1S3-202ENST00000396653 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
AP1S3-202ENST00000396653 DOCK1Q14185 1865 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 ATAD5Q96QE3 1844 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 TMEM88BA6NKF7 163 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 HSPD1P10809 573 aaKnown RBP19.63■□□□□ 0.73
AP1S3-202ENST00000396653 TDO2P48775 406 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 ARMC9Q7Z3E5 817 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 FOXP4Q8IVH2 680 aaPredicted RBP19.63■□□□□ 0.73
AP1S3-202ENST00000396653 C2orf69Q8N8R5 385 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 ESYT1Q9BSJ8 1104 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 DSCC1Q9BVC3 393 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 NAPBQ9H115 298 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 IL25Q9H293 177 aa19.63■□□□□ 0.73
AP1S3-202ENST00000396653 ROBO3Q96MS0 1386 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms