RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
RAE1-203ENST00000395841 NID2Q14112 1375 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 STK36Q9NRP7 1315 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 GOLGA6L19H0YKK7 550 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 PHKBQ93100 1093 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 MTA3Q9BTC8 594 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
RAE1-203ENST00000395841 UBE4AQ14139 1066 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 VPS37DQ86XT2 251 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
RAE1-203ENST00000395841 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
RAE1-203ENST00000395841 COL4A1P02462 1669 aa13.08□□□□□ -0.31
RAE1-203ENST00000395841 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
RAE1-203ENST00000395841 CYP7A1P22680 504 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 CDC25BP30305 580 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 TRIM29Q14134 588 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
RAE1-203ENST00000395841 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
RAE1-203ENST00000395841 BTAF1O14981 1849 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 CMA1P23946 247 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.32
RAE1-203ENST00000395841 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
RAE1-203ENST00000395841 MYL10Q9BUA6 226 aa13.08□□□□□ -0.32
RAE1-203ENST00000395841 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 IFNAR1P17181 557 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 PTGS1P23219 599 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■□□□ 13.9
RAE1-203ENST00000395841 GNL2Q13823 731 aaKnown RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 DRC7Q8IY82 874 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 WASF1Q92558 559 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 GYG1P46976 350 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 WTAPQ15007 396 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 SLC10A5Q5PT55 438 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 PYCARDQ9ULZ3 195 aa13.07□□□□□ -0.32
RAE1-203ENST00000395841 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
RAE1-203ENST00000395841 TAF1P21675 1872 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 ERICH2A1L162 156 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 BECN2A8MW95 431 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 PPP6R2O75170 966 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 RCAN1P53805 252 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 PPARAQ07869 468 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 ADGRA1Q86SQ6 560 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
RAE1-203ENST00000395841 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 ANAPC4Q9UJX5 808 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 ZNF202O95125 648 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 MRFAP1L1Q96HT8 127 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
RAE1-203ENST00000395841 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
RAE1-203ENST00000395841 UQCRHP07919 91 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 PFKFB1P16118 471 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
RAE1-203ENST00000395841 RTN1Q16799 776 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAE1-203ENST00000395841 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
RAE1-203ENST00000395841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
RAE1-203ENST00000395841 PTPAQ15257 358 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 ZRSR1Q15695 479 aaKnown RBP13.05□□□□□ -0.32
RAE1-203ENST00000395841 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 MAP3K14Q99558 947 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
RAE1-203ENST00000395841 UTRNP46939 3433 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 SLC3A2P08195 630 aaKnown RBP13.04□□□□□ -0.32
RAE1-203ENST00000395841 ERCC4Q92889 916 aaPredicted RBP13.04□□□□□ -0.32
RAE1-203ENST00000395841 PRIMPOLQ96LW4 560 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
RAE1-203ENST00000395841 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 A0A087WWV3 80 aa13.04□□□□□ -0.32
RAE1-203ENST00000395841 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
RAE1-203ENST00000395841 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms