RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 TC2NQ8N9U0 490 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 SERTAD1Q9UHV2 236 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 NCAPD2Q15021 1401 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 IKBKBO14920 756 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 GPAA1O43292 621 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 FOXO4P98177 505 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 CEP126Q9P2H0 1117 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 MRFAP1Q9Y605 127 aa16.4■□□□□ 0.22
CLIP2-203ENST00000395060 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
CLIP2-203ENST00000395060 TXLNBQ8N3L3 684 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 TRIM29Q14134 588 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 GOLGA1Q92805 767 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 SEC31BQ9NQW1 1179 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 TULP2O00295 520 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 GUCY1A2P33402 732 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 MB21D2Q8IYB1 491 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-203ENST00000395060 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 GPR161Q8N6U8 529 aaKnown RBP16.39■□□□□ 0.21
CLIP2-203ENST00000395060 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
CLIP2-203ENST00000395060 CHMP4BP1P59074 171 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
CLIP2-203ENST00000395060 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 CHMP4CQ96CF2 233 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 CDC5LQ99459 802 aaKnown RBP16.38■□□□□ 0.21
CLIP2-203ENST00000395060 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 PNKPQ96T60 521 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
CLIP2-203ENST00000395060 RABEP2Q9H5N1 569 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 MAN1B1Q9UKM7 699 aa16.38■□□□□ 0.21
CLIP2-203ENST00000395060 EYA2O00167 538 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 TUBE1Q9UJT0 475 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 MYO1CO00159 1063 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 CCT6AP40227 531 aaKnown RBP16.37■□□□□ 0.21
CLIP2-203ENST00000395060 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
CLIP2-203ENST00000395060 NR5A1Q13285 461 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 TEX13AQ9BXU3 409 aaPredicted RBP16.37■□□□□ 0.21
CLIP2-203ENST00000395060 FAN1Q9Y2M0 1017 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
CLIP2-203ENST00000395060 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
CLIP2-203ENST00000395060 CDC25AP30304 524 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-203ENST00000395060 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 ACRBPQ8NEB7 543 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 KIFC2Q96AC6 838 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 GOLGA8AA7E2F4 631 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 PTPAQ15257 358 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 CADPS2Q86UW7 1296 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 FAM89AQ96GI7 184 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 AK7Q96M32 723 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 MEGF6O75095 1541 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-203ENST00000395060 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
CLIP2-203ENST00000395060 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-203ENST00000395060 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 RBL2Q08999 1139 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 POSTNQ15063 836 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 PES1O00541 588 aaKnown RBP16.35■□□□□ 0.21
CLIP2-203ENST00000395060 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
CLIP2-203ENST00000395060 TXLNAP40222 546 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
CLIP2-203ENST00000395060 NBPF15Q8N660 670 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 MED15Q96RN5 788 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 ANGEL1Q9UNK9 670 aaKnown RBP16.35■□□□□ 0.21
CLIP2-203ENST00000395060 TFR2Q9UP52 801 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 RGPD5Q99666 1765 aa16.35■□□□□ 0.21
CLIP2-203ENST00000395060 CASP7P55210 303 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 RESP18Q5W5W9 173 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 ZBTB43O43298 467 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 ZMYND10O75800 440 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 TPM1P09493 284 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
CLIP2-203ENST00000395060 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 IGSF22Q8N9C0 903 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 RASSF4Q9H2L5 321 aa16.34■□□□□ 0.21
CLIP2-203ENST00000395060 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms