RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 FCGRTP55899 365 aa17.16■□□□□ 0.34
IGHV3-49-201ENST00000390625 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
IGHV3-49-201ENST00000390625 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
IGHV3-49-201ENST00000390625 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
IGHV3-49-201ENST00000390625 PLXNB2O15031 1838 aa17.16■□□□□ 0.34
IGHV3-49-201ENST00000390625 RFX7Q2KHR2 1363 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 PEX10O60683 326 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 SLC5A1P13866 664 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 PTPRAP18433 802 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 HOXD10P28358 340 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 TRIM32Q13049 653 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 WDR66Q8TBY9 1149 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 PARK7Q99497 189 aaKnown RBP17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 TAOK2Q9UL54 1235 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-49-201ENST00000390625 DLL1O00548 723 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 CXCL11O14625 94 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 SCYL3Q8IZE3 742 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 LPIN2Q92539 896 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 HOOK2Q96ED9 719 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
IGHV3-49-201ENST00000390625 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 UBXN2AP68543 259 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 SLAIN1Q8ND83 568 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 PAWRQ96IZ0 340 aaKnown RBP17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 HTATIP2Q9BUP3 242 aa17.13■□□□□ 0.33
IGHV3-49-201ENST00000390625 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 PICALMQ13492 652 aa17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 ZMYND8Q9ULU4 1186 aaPredicted RBP17.12■□□□□ 0.33
IGHV3-49-201ENST00000390625 EVI5O60447 810 aa17.11■□□□□ 0.33
IGHV3-49-201ENST00000390625 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-49-201ENST00000390625 Q7L0L9 218 aa17.11■□□□□ 0.33
IGHV3-49-201ENST00000390625 PAK6Q9NQU5 681 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-49-201ENST00000390625 NR2E3Q9Y5X4 410 aa17.11■□□□□ 0.33
IGHV3-49-201ENST00000390625 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 MAP3K10Q02779 954 aa17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 ZSCAN29Q8IWY8 852 aaPredicted RBP17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 GAKO14976 1311 aa17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
IGHV3-49-201ENST00000390625 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 SYN1P17600 705 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 TIMM10P62072 90 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 RASGRF1Q13972 1273 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 C7orf61Q8IZ16 206 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 PICK1Q9NRD5 415 aa17.09■□□□□ 0.33
IGHV3-49-201ENST00000390625 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.33
IGHV3-49-201ENST00000390625 SALL1Q9NSC2 1324 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 ENTPD3O75355 529 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 BTDP43251 543 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 JAG1P78504 1218 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 IRF5Q13568 498 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 PI16Q6UXB8 463 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.32
IGHV3-49-201ENST00000390625 RHBDL3P58872 404 aa17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 GDF15Q99988 308 aa17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 ABCF2Q9UG63 623 aa17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
IGHV3-49-201ENST00000390625 MYO5AQ9Y4I1 1855 aaKnown RBP17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 PTPRCP08575 1304 aa17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
IGHV3-49-201ENST00000390625 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
IGHV3-49-201ENST00000390625 SPP2Q13103 211 aa17.05■□□□□ 0.32
IGHV3-49-201ENST00000390625 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
IGHV3-49-201ENST00000390625 CDK5RAP2Q96SN8 1893 aa17.05■□□□□ 0.32
IGHV3-49-201ENST00000390625 CIAO1O76071 339 aa17.04■□□□□ 0.32
IGHV3-49-201ENST00000390625 HMGCS2P54868 508 aa17.04■□□□□ 0.32
IGHV3-49-201ENST00000390625 MECOMQ03112 1051 aa17.04■□□□□ 0.32
IGHV3-49-201ENST00000390625 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
IGHV3-49-201ENST00000390625 SLC45A1Q9Y2W3 748 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms