RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 C4BP0C0L5 1744 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 RREB1Q92766 1687 aa9.16□□□□□ -0.94
TRBV28-201ENST00000390400 KIF16BQ96L93 1317 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 FRAT2O75474 233 aaPredicted RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 BCAR3O75815 825 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 ANXA1P04083 346 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 MYL6BP14649 208 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 CANXP27824 592 aaKnown RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 EIF1AXP47813 144 aaKnown RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 EZH2Q15910 746 aaKnown RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 SKOR2Q2VWA4 1001 aaPredicted RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 INTS5Q6P9B9 1019 aaKnown RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.94
TRBV28-201ENST00000390400 ZBTB1Q9Y2K1 713 aa9.15□□□□□ -0.94
TRBV28-201ENST00000390400 FAM13AO94988 1023 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 PIP4K2AP48426 406 aaPredicted RBP9.14□□□□□ -0.95
TRBV28-201ENST00000390400 DSC3Q14574 896 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 LDLRAD1Q5T700 205 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 STAG2Q8N3U4 1231 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 CNKSR1Q969H4 720 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 SETDB2Q96T68 719 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
TRBV28-201ENST00000390400 NUP188Q5SRE5 1749 aa9.14□□□□□ -0.95
TRBV28-201ENST00000390400 UBR3Q6ZT12 1888 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 EML1O00423 815 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 IPO8O15397 1037 aaKnown RBP9.13□□□□□ -0.95
TRBV28-201ENST00000390400 IL6STP40189 918 aaPredicted RBP9.13□□□□□ -0.95
TRBV28-201ENST00000390400 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
TRBV28-201ENST00000390400 XAGE3Q8WTP9 111 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 KLRG1Q96E93 195 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 AGBL1Q96MI9 1066 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 ANTXR1Q9H6X2 564 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 RRAGDQ9NQL2 400 aaPredicted RBP9.13□□□□□ -0.95
TRBV28-201ENST00000390400 PARP3Q9Y6F1 533 aa9.13□□□□□ -0.95
TRBV28-201ENST00000390400 COL15A1P39059 1388 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 PTPRCP08575 1304 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 A0A087WZG4 1122 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 CDK2AP1O14519 115 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 TREHO43280 583 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 RPS6KA4O75676 772 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 DDX58O95786 925 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 ADH1AP07327 375 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 SLC19A1P41440 591 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 FMR1Q06787 632 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 AIMP1Q12904 312 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 ZKSCAN2Q63HK3 967 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 G2E3Q7L622 706 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 SPNS2Q8IVW8 549 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 NAP1L5Q96NT1 182 aaPredicted RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 PHAXQ9H814 394 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 STK32BQ9NY57 414 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 PKD2L1Q9P0L9 805 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 STIM2Q9P246 746 aa9.12□□□□□ -0.95
TRBV28-201ENST00000390400 NOB1Q9ULX3 412 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 RTCBQ9Y3I0 505 aaKnown RBP9.12□□□□□ -0.95
TRBV28-201ENST00000390400 TUBGCP6Q96RT7 1819 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 GPR182O15218 404 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 VAMP1P23763 118 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 PSMA6P60900 246 aaKnown RBP9.11□□□□□ -0.95
TRBV28-201ENST00000390400 NNTQ13423 1086 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 TLR1Q15399 786 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
TRBV28-201ENST00000390400 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.11□□□□□ -0.95
TRBV28-201ENST00000390400 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 ARHGAP45Q92619 1136 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 VTI1AQ96AJ9 217 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 MYO19Q96H55 970 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 CRBNQ96SW2 442 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 ESYT1Q9BSJ8 1104 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 API5Q9BZZ5 524 aaKnown RBP9.11□□□□□ -0.95
TRBV28-201ENST00000390400 TFCP2L1Q9NZI6 479 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 CHMP5Q9NZZ3 219 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 HCN4Q9Y3Q4 1203 aa9.11□□□□□ -0.95
TRBV28-201ENST00000390400 TCF3P15923 654 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 CENPCQ03188 943 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 COL19A1Q14993 1142 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 TRAPPC3LQ5T215 181 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 SPRYD7Q5W111 196 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 KSR2Q6VAB6 950 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 ATF7IPQ6VMQ6 1270 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 PLBD2Q8NHP8 589 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 ZFAND3Q9H8U3 227 aa9.1□□□□□ -0.95
TRBV28-201ENST00000390400 MAP3K15Q6ZN16 1313 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 C4AP0C0L4 1744 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 QSER1Q2KHR3 1735 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 PI4KAP2A4QPH2 592 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 PLIN1O60240 522 aa9.09□□□□□ -0.95
TRBV28-201ENST00000390400 ALDH1A1P00352 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms