RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 RCAN1P53805 252 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 PTPAQ15257 358 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 WASF1Q92558 559 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 SLC4A4Q9Y6R1 1079 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 ZNF804BA4D1E1 1349 aa17.33■□□□□ 0.36
SCFD2-201ENST00000388940 FMNL1O95466 1100 aaPredicted RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 RXRAP19793 462 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 PHKBQ93100 1093 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 RGL2O15211 777 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 SLC3A2P08195 630 aaKnown RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 PFKFB1P16118 471 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 TRIM29Q14134 588 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
SCFD2-201ENST00000388940 HPSEQ9Y251 543 aa17.32■□□□□ 0.36
SCFD2-201ENST00000388940 PRKAB2O43741 272 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 TDO2P48775 406 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 SART3Q15020 963 aaKnown RBP17.31■□□□□ 0.36
SCFD2-201ENST00000388940 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 MTERF4Q7Z6M4 381 aaKnown RBP17.31■□□□□ 0.36
SCFD2-201ENST00000388940 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
SCFD2-201ENST00000388940 CASZ1Q86V15 1759 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 NLRP12P59046 1061 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 LRMPQ12912 555 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
SCFD2-201ENST00000388940 AOPEPQ8N6M6 819 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
SCFD2-201ENST00000388940 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
SCFD2-201ENST00000388940 ZRSR1Q15695 479 aaKnown RBP17.3■□□□□ 0.36
SCFD2-201ENST00000388940 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SCFD2-201ENST00000388940 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
SCFD2-201ENST00000388940 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
SCFD2-201ENST00000388940 WTAPQ15007 396 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 LRRC8AQ8IWT6 810 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
SCFD2-201ENST00000388940 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
SCFD2-201ENST00000388940 A0A087WWV3 80 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 CUTAO60888 179 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 CHAF1AQ13111 956 aaPredicted RBP17.29■□□□□ 0.36
SCFD2-201ENST00000388940 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 TUBE1Q9UJT0 475 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 MROH7-TTC4A0A0A0MT08 1334 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 COL4A1P02462 1669 aa17.29■□□□□ 0.36
SCFD2-201ENST00000388940 A0A0G2JS52 829 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 CYP7A1P22680 504 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 MARCKSP29966 332 aaPredicted RBP17.28■□□□□ 0.36
SCFD2-201ENST00000388940 SYKP43405 635 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 DPCR1Q3MIW9 517 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
SCFD2-201ENST00000388940 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 ERICH2A1L162 156 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 PPARAQ07869 468 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 RTN1Q16799 776 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 SHC4Q6S5L8 630 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
SCFD2-201ENST00000388940 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
SCFD2-201ENST00000388940 SMTNL1A8MU46 457 aa17.27■□□□□ 0.36
SCFD2-201ENST00000388940 MMP1P03956 469 aa17.27■□□□□ 0.36
SCFD2-201ENST00000388940 NBPF11Q86T75 865 aa17.27■□□□□ 0.36
SCFD2-201ENST00000388940 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
SCFD2-201ENST00000388940 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.35
SCFD2-201ENST00000388940 NOSTRINQ8IVI9 506 aa17.27■□□□□ 0.35
SCFD2-201ENST00000388940 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.35
SCFD2-201ENST00000388940 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.35
SCFD2-201ENST00000388940 IMPACTQ9P2X3 320 aa17.27■□□□□ 0.35
SCFD2-201ENST00000388940 MAGEB6P1A0A0J9YX57 407 aa17.26■□□□□ 0.35
SCFD2-201ENST00000388940 IKBKBO14920 756 aa17.26■□□□□ 0.35
SCFD2-201ENST00000388940 DEXIO95424 95 aa17.26■□□□□ 0.35
SCFD2-201ENST00000388940 SAFBQ15424 915 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCFD2-201ENST00000388940 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
SCFD2-201ENST00000388940 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
SCFD2-201ENST00000388940 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
SCFD2-201ENST00000388940 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
SCFD2-201ENST00000388940 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
SCFD2-201ENST00000388940 GSDMDP57764 484 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 TPM4P67936 248 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 ADGRA1Q86SQ6 560 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 MYH6P13533 1939 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 SEC23AQ15436 765 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 FANCBQ8NB91 859 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 ESR2Q92731 530 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
SCFD2-201ENST00000388940 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 TAF1P21675 1872 aa17.25■□□□□ 0.35
SCFD2-201ENST00000388940 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms