RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 MCMDC2Q4G0Z9 681 aa21.22■□□□□ 0.99
CD9-202ENST00000382515 NBPF12Q5TAG4 269 aaPredicted RBP21.22■□□□□ 0.99
CD9-202ENST00000382515 ARMC9Q7Z3E5 817 aa21.22■□□□□ 0.99
CD9-202ENST00000382515 FOXP4Q8IVH2 680 aaPredicted RBP21.22■□□□□ 0.99
CD9-202ENST00000382515 GBA2Q9HCG7 927 aaPredicted RBP21.22■□□□□ 0.99
CD9-202ENST00000382515 PI4KBQ9UBF8 816 aa21.22■□□□□ 0.99
CD9-202ENST00000382515 TBC1D12O60347 775 aa21.21■□□□□ 0.99
CD9-202ENST00000382515 PICALMQ13492 652 aa21.21■□□□□ 0.99
CD9-202ENST00000382515 MAP3K11Q16584 847 aa21.21■□□□□ 0.99
CD9-202ENST00000382515 TTC6Q86TZ1 520 aa21.21■□□□□ 0.99
CD9-202ENST00000382515 ZSCAN29Q8IWY8 852 aaPredicted RBP21.21■□□□□ 0.99
CD9-202ENST00000382515 DDX4Q9NQI0 724 aaKnown RBP21.21■□□□□ 0.99
CD9-202ENST00000382515 SCAF8Q9UPN6 1271 aaKnown RBP21.21■□□□□ 0.99
CD9-202ENST00000382515 ATRNL1Q5VV63 1379 aa21.21■□□□□ 0.99
CD9-202ENST00000382515 PATL2C9JE40 543 aaKnown RBP21.2■□□□□ 0.98
CD9-202ENST00000382515 GPAA1O43292 621 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 PRAMEF18Q5VWM3 479 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 LCORLQ8N3X6 602 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 RUFY2Q8WXA3 655 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 ARMT1Q9H993 441 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 ZNF408Q9H9D4 720 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 MKRN1Q9UHC7 482 aaKnown RBP21.2■□□□□ 0.98
CD9-202ENST00000382515 SLC4A4Q9Y6R1 1079 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 FLT1P17948 1338 aa21.2■□□□□ 0.98
CD9-202ENST00000382515 COL2A1P02458 1487 aaPredicted RBP21.2■□□□□ 0.98
CD9-202ENST00000382515 HLA-DOAP06340 250 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 IREB2P48200 963 aaKnown RBP21.19■□□□□ 0.98
CD9-202ENST00000382515 AMOTL1Q8IY63 956 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 CSRNP1Q96S65 589 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 NACAP1Q9BZK3 213 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 HERC5Q9UII4 1024 aaKnown RBP21.19■□□□□ 0.98
CD9-202ENST00000382515 TLL2Q9Y6L7 1015 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 MYH2Q9UKX2 1941 aa21.19■□□□□ 0.98
CD9-202ENST00000382515 SLFNL1Q499Z3 407 aa21.18■□□□□ 0.98
CD9-202ENST00000382515 SAPCD2Q86UD0 394 aa21.18■□□□□ 0.98
CD9-202ENST00000382515 METTL16Q86W50 562 aaKnown RBP21.18■□□□□ 0.98
CD9-202ENST00000382515 MAPKAPK5Q8IW41 473 aa21.18■□□□□ 0.98
CD9-202ENST00000382515 ZFPM1Q8IX07 1006 aa21.18■□□□□ 0.98
CD9-202ENST00000382515 DCP1AQ9NPI6 582 aaPredicted RBP21.18■□□□□ 0.98
CD9-202ENST00000382515 DDTLA6NHG4 134 aaPredicted RBP21.17■□□□□ 0.98
CD9-202ENST00000382515 FMR1Q06787 632 aaKnown RBP eCLIP21.17■□□□□ 0.98
CD9-202ENST00000382515 TTLL12Q14166 644 aaPredicted RBP21.17■□□□□ 0.98
CD9-202ENST00000382515 DLK2Q6UY11 383 aa21.17■□□□□ 0.98
CD9-202ENST00000382515 ZNF341Q9BYN7 854 aa21.17■□□□□ 0.98
CD9-202ENST00000382515 DOCK2Q92608 1830 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 USP2O75604 605 aaPredicted RBP21.16■□□□□ 0.98
CD9-202ENST00000382515 CHGBP05060 677 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 POLR3DP05423 398 aaPredicted RBP21.16■□□□□ 0.98
CD9-202ENST00000382515 LDLRAD1Q5T700 205 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 SH3BP5LQ7L8J4 393 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 EHD4Q9H223 541 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 MCM9Q9NXL9 1143 aa21.16■□□□□ 0.98
CD9-202ENST00000382515 GSG1L2A8MUP6 293 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 M0R2C6 588 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 HUNKP57058 714 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 MAP3K9P80192 1104 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 NMIQ13287 307 aaPredicted RBP21.15■□□□□ 0.98
CD9-202ENST00000382515 SBK1Q52WX2 424 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 ANKRD13AQ8IZ07 590 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 KLRG1Q96E93 195 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 FAM227BQ96M60 508 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 SEC62Q99442 399 aaKnown RBP21.15■□□□□ 0.98
CD9-202ENST00000382515 ZNF112Q9UJU3 913 aa21.15■□□□□ 0.98
CD9-202ENST00000382515 ABT1Q9ULW3 272 aaKnown RBP21.15■□□□□ 0.98
CD9-202ENST00000382515 ANGEL1Q9UNK9 670 aaKnown RBP21.15■□□□□ 0.98
CD9-202ENST00000382515 RAD50Q92878 1312 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 RASSF10A6NK89 507 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 APPP05067 770 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 CHMLP26374 656 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 ALX1Q15699 326 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 DEFB115Q30KQ5 88 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.97
CD9-202ENST00000382515 SDR42E1Q8WUS8 393 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 CCDC102AQ96A19 550 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 ARPP21Q9UBL0 812 aaPredicted RBP21.14■□□□□ 0.97
CD9-202ENST00000382515 PALD1Q9ULE6 856 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 MAST2Q6P0Q8 1798 aa21.14■□□□□ 0.97
CD9-202ENST00000382515 PRKAB2O43741 272 aa21.13■□□□□ 0.97
CD9-202ENST00000382515 IFNL3Q8IZI9 196 aa21.13■□□□□ 0.97
CD9-202ENST00000382515 TRIM34Q9BYJ4 488 aa21.13■□□□□ 0.97
CD9-202ENST00000382515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.13■□□□□ 0.97
CD9-202ENST00000382515 GINM1Q9NU53 330 aa21.13■□□□□ 0.97
CD9-202ENST00000382515 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
CD9-202ENST00000382515 POLR2AP24928 1970 aaKnown RBP21.12■□□□□ 0.97
CD9-202ENST00000382515 CCDC171Q6TFL3 1326 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 A0A0D9SFI3 127 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 ECE1P42892 770 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 C12orf60Q5U649 245 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 MIGA2Q7L4E1 593 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 CDAN1Q8IWY9 1227 aa21.12■□□□□ 0.97
CD9-202ENST00000382515 CRACR2BQ8N4Y2 399 aaPredicted RBP21.12■□□□□ 0.97
CD9-202ENST00000382515 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.12■□□□□ 0.97
CD9-202ENST00000382515 ECM29Q5VYK3 1845 aa21.11■□□□□ 0.97
CD9-202ENST00000382515 USP17L12C9JPN9 530 aa21.11■□□□□ 0.97
CD9-202ENST00000382515 USP17L21D6R901 530 aa21.11■□□□□ 0.97
CD9-202ENST00000382515 UBE2Q2LH0YL09 131 aa21.11■□□□□ 0.97
CD9-202ENST00000382515 CTNND1O60716 968 aaKnown RBP21.11■□□□□ 0.97
CD9-202ENST00000382515 RGMBQ6NW40 437 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms