RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
CCDC107-204ENST00000378409 ZBED3Q96IU2 234 aaPredicted RBP18.78■□□□□ 0.6
CCDC107-204ENST00000378409 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
CCDC107-204ENST00000378409 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CCDC107-204ENST00000378409 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.6
CCDC107-204ENST00000378409 CLRN2A0PK11 232 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 MINDY4BA8MYZ0 360 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 USP17L12C9JPN9 530 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 USP17L21D6R901 530 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 WNT10BO00744 389 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 ZNF213O14771 459 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 MYO1BO43795 1136 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 EGFRP00533 1210 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 EPS15P42566 896 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 NFIAQ12857 509 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 KCNB2Q92953 911 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 DDX4Q9NQI0 724 aaKnown RBP18.77■□□□□ 0.6
CCDC107-204ENST00000378409 ARPP21Q9UBL0 812 aaPredicted RBP18.77■□□□□ 0.6
CCDC107-204ENST00000378409 ZNF70Q9UC06 446 aaPredicted RBP18.77■□□□□ 0.6
CCDC107-204ENST00000378409 MKRN1Q9UHC7 482 aaKnown RBP18.77■□□□□ 0.6
CCDC107-204ENST00000378409 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
CCDC107-204ENST00000378409 CYP2D7A0A087X1C5 515 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 GLTPD2A6NH11 291 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 C1QTNF8P60827 252 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 SPDYE2Q495Y8 402 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 AMOTL1Q8IY63 956 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 WDR90Q96KV7 1748 aa18.76■□□□□ 0.59
CCDC107-204ENST00000378409 SIPA1L1O43166 1804 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 POLR3DP05423 398 aaPredicted RBP18.75■□□□□ 0.59
CCDC107-204ENST00000378409 CYP2D6P10635 497 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 PPARAQ07869 468 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 SBK1Q52WX2 424 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 L3MBTL3Q96JM7 780 aaPredicted RBP18.75■□□□□ 0.59
CCDC107-204ENST00000378409 KIF2CQ99661 725 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 IDI2Q9BXS1 227 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
CCDC107-204ENST00000378409 TCP10L2B9ZVM9 353 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 TCP10Q12799 353 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 KRT32Q14532 448 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 TSGA10IPQ3SY00 556 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 TRPM4Q8TD43 1214 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 JAKMIP1Q96N16 626 aaKnown RBP18.74■□□□□ 0.59
CCDC107-204ENST00000378409 NBPF3Q9H094 633 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 OSBPL5Q9H0X9 879 aaPredicted RBP18.74■□□□□ 0.59
CCDC107-204ENST00000378409 FAM198AQ9UFP1 575 aa18.74■□□□□ 0.59
CCDC107-204ENST00000378409 E7EWF7 191 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 EVX2Q03828 476 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 C12orf60Q5U649 245 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 STOX1Q6ZVD7 989 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 TBC1D10CQ8IV04 446 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
CCDC107-204ENST00000378409 ANAPC4Q9UJX5 808 aa18.73■□□□□ 0.59
CCDC107-204ENST00000378409 RBM19Q9Y4C8 960 aaKnown RBP18.73■□□□□ 0.59
CCDC107-204ENST00000378409 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
CCDC107-204ENST00000378409 ENTPD3O75355 529 aa18.72■□□□□ 0.59
CCDC107-204ENST00000378409 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
CCDC107-204ENST00000378409 FKBP1CQ5VVH2 108 aa18.72■□□□□ 0.59
CCDC107-204ENST00000378409 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
CCDC107-204ENST00000378409 HACL1Q9UJ83 578 aa18.72■□□□□ 0.59
CCDC107-204ENST00000378409 ASTN2O75129 1339 aaPredicted RBP18.72■□□□□ 0.59
CCDC107-204ENST00000378409 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
CCDC107-204ENST00000378409 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
CCDC107-204ENST00000378409 PSMA5P28066 241 aa18.71■□□□□ 0.59
CCDC107-204ENST00000378409 RABEP1Q15276 862 aa18.71■□□□□ 0.59
CCDC107-204ENST00000378409 AKNAD1Q5T1N1 836 aa18.71■□□□□ 0.59
CCDC107-204ENST00000378409 ZSCAN29Q8IWY8 852 aaPredicted RBP18.71■□□□□ 0.59
CCDC107-204ENST00000378409 COL2A1P02458 1487 aaPredicted RBP18.71■□□□□ 0.59
CCDC107-204ENST00000378409 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 ROBO3Q96MS0 1386 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 TNNI2P48788 182 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 PLCD1P51178 756 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 HIRAP54198 1017 aaPredicted RBP18.7■□□□□ 0.58
CCDC107-204ENST00000378409 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 STAG1Q8WVM7 1258 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 NEK1Q96PY6 1258 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 UPF3BQ9BZI7 483 aaKnown RBP18.7■□□□□ 0.58
CCDC107-204ENST00000378409 TM6SF1Q9BZW5 370 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 RNF41Q9H4P4 317 aaPredicted RBP18.7■□□□□ 0.58
CCDC107-204ENST00000378409 NEDD4P46934 1319 aa18.7■□□□□ 0.58
CCDC107-204ENST00000378409 IQCA1LA6NCM1 817 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 CPA1P15085 419 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 EPHX2P34913 555 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 TRDNQ13061 729 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 ANGEL2Q5VTE6 544 aaKnown RBP18.69■□□□□ 0.58
CCDC107-204ENST00000378409 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
CCDC107-204ENST00000378409 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 DYNLL2Q96FJ2 89 aa18.69■□□□□ 0.58
CCDC107-204ENST00000378409 DHX36Q9H2U1 1008 aaKnown RBP18.69■□□□□ 0.58
CCDC107-204ENST00000378409 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms