RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PCP11498 1178 aaKnown RBP9.54□□□□□ -0.88
UBR4-202ENST00000375224 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
UBR4-202ENST00000375224 RCAN1P53805 252 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 CLSTN2Q9H4D0 955 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 CCDC39Q9UFE4 941 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 C4BP0C0L5 1744 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 AFF2P51816 1311 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 LIG1P18858 919 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 HIBADHP31937 336 aaKnown RBP9.53□□□□□ -0.88
UBR4-202ENST00000375224 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
UBR4-202ENST00000375224 WASF1Q92558 559 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 LY9Q9HBG7 655 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 ANAPC4Q9UJX5 808 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 KDM4AO75164 1064 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 CAVIN2O95810 425 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 FOSBP53539 338 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 SPTY2D1Q68D10 685 aaPredicted RBP9.53□□□□□ -0.88
UBR4-202ENST00000375224 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 BRIP1Q9BX63 1249 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 RTEL1Q9NZ71 1219 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
UBR4-202ENST00000375224 CCDC196A0A1B0GTZ2 297 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 GOLGA8AA7E2F4 631 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 PPARAQ07869 468 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 PPP2R5BQ15173 497 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 MIGA1Q8NAN2 632 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.88
UBR4-202ENST00000375224 NID2Q14112 1375 aa9.52□□□□□ -0.88
UBR4-202ENST00000375224 STK36Q9NRP7 1315 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 MYH13Q9UKX3 1938 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 PRKAB2O43741 272 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
UBR4-202ENST00000375224 GUCY1B3Q02153 619 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 TRIM29Q14134 588 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 WTAPQ15007 396 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 RBM43Q6ZSC3 357 aaKnown RBP9.52□□□□□ -0.89
UBR4-202ENST00000375224 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 ESR2Q92731 530 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 TAF1P21675 1872 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 YEATS4O95619 227 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 USP28Q96RU2 1077 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 LEMD3Q9Y2U8 911 aa9.52□□□□□ -0.89
UBR4-202ENST00000375224 SSRP1Q08945 709 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 SASS6Q6UVJ0 657 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 FAM196AQ6ZSG2 479 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 MICU3Q86XE3 530 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 ALG1Q9BT22 464 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 TSPYL1Q9H0U9 437 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 COL4A1P02462 1669 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 NT5C2P49902 561 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 GRAPQ13588 217 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 STK38Q15208 465 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 GRAPLQ8TC17 118 aaPredicted RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 UBAC1Q9BSL1 405 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 A0A1W2PQ27 194 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 A0A1W2PQ64 194 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 A0A1W2PQD8 194 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 TM4SF1P30408 202 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 ME1P48163 572 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 MMP14P50281 582 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 TYRO3Q06418 890 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 TRIM22Q8IYM9 498 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 FAM200AQ8TCP9 573 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 TIGD1Q96MW7 591 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 CRNKL1Q9BZJ0 848 aaKnown RBP9.51□□□□□ -0.89
UBR4-202ENST00000375224 CACNA1SQ13698 1873 aa9.51□□□□□ -0.89
UBR4-202ENST00000375224 KINO60870 393 aaKnown RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 NR1I2O75469 434 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 IFNAR1P17181 557 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 SLC20A2Q08357 652 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 GNL2Q13823 731 aaKnown RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 ADALQ6DHV7 355 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 NOL7Q9UMY1 257 aaKnown RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 COL1A1P02452 1464 aaPredicted RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 MINDY4BA8MYZ0 360 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 KIF23Q02241 960 aaPredicted RBP9.5□□□□□ -0.89
UBR4-202ENST00000375224 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 CAMK4Q16566 473 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
UBR4-202ENST00000375224 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms