RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 SNX21Q969T3 373 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 IDI2Q9BXS1 227 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 PCDHAC2Q9Y5I4 1007 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 PCP11498 1178 aaKnown RBP20.45■□□□□ 0.86
HLA-DMA-201ENST00000374843 STAG1Q8WVM7 1258 aa20.45■□□□□ 0.86
HLA-DMA-201ENST00000374843 USP17L12C9JPN9 530 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 USP17L21D6R901 530 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 HMGB1P09429 215 aaKnown RBP20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 CASTP20810 708 aaKnown RBP20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 RBM5P52756 815 aaKnown RBP eCLIP20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 MAPKAPK5Q8IW41 473 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 TTC14Q96N46 770 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 NEK1Q96PY6 1258 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 MYOZ2Q9NPC6 264 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
HLA-DMA-201ENST00000374843 FGRP09769 529 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 SPDYE2Q495Y8 402 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 C12orf60Q5U649 245 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 RUFY3Q7L099 469 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 PRMT6Q96LA8 375 aaPredicted RBP20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 UPF3BQ9BZI7 483 aaKnown RBP20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 RNF41Q9H4P4 317 aaPredicted RBP20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 DDX4Q9NQI0 724 aaKnown RBP20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 MCM9Q9NXL9 1143 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 CYP46A1Q9Y6A2 500 aa20.43■□□□□ 0.86
HLA-DMA-201ENST00000374843 ST18O60284 1047 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 RPS6KB1P23443 525 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 NT5C2P49902 561 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 AKNAD1Q5T1N1 836 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 FKBP1CQ5VVH2 108 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 BLOC1S2Q6QNY1 142 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 OSBPL5Q9H0X9 879 aaPredicted RBP20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 ALDH8A1Q9H2A2 487 aaPredicted RBP20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 NEDD4P46934 1319 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 ATRNL1Q5VV63 1379 aa20.42■□□□□ 0.86
HLA-DMA-201ENST00000374843 MYH1P12882 1939 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 CYP2D7A0A087X1C5 515 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 ENTPD3O75355 529 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 NEK4P51957 841 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 NFIAQ12857 509 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 AMOTL1Q8IY63 956 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 GPRC5DQ9NZD1 345 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 FAM198AQ9UFP1 575 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 TAOK2Q9UL54 1235 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 TACC3Q9Y6A5 838 aa20.41■□□□□ 0.86
HLA-DMA-201ENST00000374843 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 CYP2D6P10635 497 aa20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 CTDSPL2Q05D32 466 aa20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 TDRD3Q9H7E2 651 aaKnown RBP20.4■□□□□ 0.86
HLA-DMA-201ENST00000374843 WNT10BO00744 389 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 ORC4O43929 436 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 SLC3A2P08195 630 aaKnown RBP20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 MCM2P49736 904 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 MFSD6Q6ZSS7 791 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 DHX32Q7L7V1 743 aaKnown RBP20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 RALYLQ86SE5 291 aaKnown RBP20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 FBXL16Q8N461 479 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 L3MBTL3Q96JM7 780 aaPredicted RBP20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 KRT23Q9C075 422 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 TMOD2Q9NZR1 351 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 ZNF70Q9UC06 446 aaPredicted RBP20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 SIPA1L1O43166 1804 aa20.39■□□□□ 0.85
HLA-DMA-201ENST00000374843 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 CPA1P15085 419 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 EXOSC10Q01780 885 aaKnown RBP20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 TRDNQ13061 729 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 PICALMQ13492 652 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 BECN1Q14457 450 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 EHD4Q9H223 541 aa20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 SAP30BPQ9UHR5 308 aaKnown RBP20.38■□□□□ 0.85
HLA-DMA-201ENST00000374843 CNTNAP1P78357 1384 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 MYO1BO43795 1136 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 EGFRP00533 1210 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 POLR3DP05423 398 aaPredicted RBP20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 CACNB3P54284 484 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 EVX2Q03828 476 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 KIF4BQ2VIQ3 1234 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 HSCBQ8IWL3 235 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 AGXT2Q9BYV1 514 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 DHX36Q9H2U1 1008 aaKnown RBP20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
HLA-DMA-201ENST00000374843 UTRNP46939 3433 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 H7C1D1 291 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 MCM5P33992 734 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 PLCD1P51178 756 aa20.36■□□□□ 0.85
HLA-DMA-201ENST00000374843 ANTXR2P58335 489 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms