RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 SMIM22K7EJ46 135 aa19.81■□□□□ 0.76
PTPN20-203ENST00000374342 APOA5Q6Q788 366 aa19.81■□□□□ 0.76
PTPN20-203ENST00000374342 TMEM87AQ8NBN3 555 aa19.81■□□□□ 0.76
PTPN20-203ENST00000374342 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
PTPN20-203ENST00000374342 ZNF622Q969S3 477 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTPN20-203ENST00000374342 CPLX1O14810 134 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 DHX16O60231 1041 aaKnown RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 MBD3O95983 291 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 SF3B2Q13435 895 aaKnown RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 CTR9Q6PD62 1173 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 MPNDQ8N594 471 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 ZKSCAN3Q9BRR0 538 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 DCP1AQ9NPI6 582 aaPredicted RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 DDX60LQ5H9U9 1706 aaKnown RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 IGSF3O75054 1194 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 RXRAP19793 462 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 METAP2P50579 478 aaKnown RBP eCLIP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 DPP8Q6V1X1 898 aaPredicted RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 MICU3Q86XE3 530 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 NOL10Q9BSC4 688 aaKnown RBP19.8■□□□□ 0.76
PTPN20-203ENST00000374342 ATP8A2Q9NTI2 1148 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 MROH7-TTC4A0A0A0MT08 1334 aa19.8■□□□□ 0.76
PTPN20-203ENST00000374342 USP17L12C9JPN9 530 aa19.79■□□□□ 0.76
PTPN20-203ENST00000374342 USP17L21D6R901 530 aa19.79■□□□□ 0.76
PTPN20-203ENST00000374342 BAG6P46379 1132 aa19.79■□□□□ 0.76
PTPN20-203ENST00000374342 SART3Q15020 963 aaKnown RBP19.79■□□□□ 0.76
PTPN20-203ENST00000374342 MFSD14BQ5SR56 506 aa19.79■□□□□ 0.76
PTPN20-203ENST00000374342 TMX4Q9H1E5 349 aaPredicted RBP19.79■□□□□ 0.76
PTPN20-203ENST00000374342 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
PTPN20-203ENST00000374342 CCDC69A6NI79 296 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 GADD45BO75293 160 aaPredicted RBP19.78■□□□□ 0.76
PTPN20-203ENST00000374342 LIFRP42702 1097 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 SGMS1Q86VZ5 419 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 ESR2Q92731 530 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 MYL10Q9BUA6 226 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 RBM27Q9P2N5 1060 aaKnown RBP19.78■□□□□ 0.76
PTPN20-203ENST00000374342 ARPP21Q9UBL0 812 aaPredicted RBP19.78■□□□□ 0.76
PTPN20-203ENST00000374342 ERICH2A1L162 156 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 H0YIN7 160 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 ZBTB43O43298 467 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 WTAPQ15007 396 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 FAM173BQ6P4H8 233 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 CCDC144CPQ8IYA2 1237 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 SH3RF3Q8TEJ3 882 aaPredicted RBP19.78■□□□□ 0.76
PTPN20-203ENST00000374342 FBXW7Q969H0 707 aa19.78■□□□□ 0.76
PTPN20-203ENST00000374342 ADAMTSL1Q8N6G6 1762 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 GOLGA6L3A6NEY3 463 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 LDHCP07864 332 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 FDPSP14324 419 aaKnown RBP19.77■□□□□ 0.76
PTPN20-203ENST00000374342 USP5P45974 858 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 KRT85P78386 507 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 EVX2Q03828 476 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 RESTQ13127 1097 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 CSPP1Q1MSJ5 1256 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 DEFB132Q7Z7B7 95 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 TBC1D22AQ8WUA7 517 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 UBAC1Q9BSL1 405 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
PTPN20-203ENST00000374342 PRDM1O75626 825 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 BAG3O95817 575 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 CYP2D6P10635 497 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 RTFDC1Q9BY42 306 aaPredicted RBP19.76■□□□□ 0.75
PTPN20-203ENST00000374342 COA1Q9GZY4 146 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 MYH1P12882 1939 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 FAM205AQ6ZU69 1335 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 CHRNA5P30532 468 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 GTF2IP78347 998 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 SLC4A8Q2Y0W8 1093 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 TPRNQ4KMQ1 711 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 STYK1Q6J9G0 422 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 ZC3H12CQ9C0D7 883 aaKnown RBP19.76■□□□□ 0.75
PTPN20-203ENST00000374342 MCM9Q9NXL9 1143 aa19.76■□□□□ 0.75
PTPN20-203ENST00000374342 ORC3Q9UBD5 711 aaPredicted RBP19.76■□□□□ 0.75
PTPN20-203ENST00000374342 RANBP6O60518 1105 aaKnown RBP19.75■□□□□ 0.75
PTPN20-203ENST00000374342 GUCY1B3Q02153 619 aa19.75■□□□□ 0.75
PTPN20-203ENST00000374342 MYH6P13533 1939 aa19.75■□□□□ 0.75
PTPN20-203ENST00000374342 TNKSO95271 1327 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 CDKL5O76039 1030 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 PCP11498 1178 aaKnown RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 CDC27P30260 824 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 BTDP43251 543 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 ZSCAN23Q3MJ62 389 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 SYNE3Q6ZMZ3 975 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 MTA3Q9BTC8 594 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 NID2Q14112 1375 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 FSD2A1L4K1 749 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 SLC3A2P08195 630 aaKnown RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 USP17L8P0C7I0 530 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 DOK7Q18PE1 504 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 SBK1Q52WX2 424 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 PDGFDQ9GZP0 370 aaPredicted RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 ZSCAN16Q9H4T2 348 aaPredicted RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 TMEM63CQ9P1W3 806 aa19.74■□□□□ 0.75
PTPN20-203ENST00000374342 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 ZNF646O15015 1829 aaPredicted RBP19.74■□□□□ 0.75
PTPN20-203ENST00000374342 PPP4CP60510 307 aa19.73■□□□□ 0.75
PTPN20-203ENST00000374342 CPLX2Q6PUV4 134 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms