RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 USP21Q9UK80 565 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 RPS8P62241 208 aaKnown RBP13.62□□□□□ -0.23
PDE6C-201ENST00000371447 RTN1Q16799 776 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 KCNF1Q9H3M0 494 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 SMC2O95347 1197 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 DPCR1Q3MIW9 517 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
PDE6C-201ENST00000371447 ZNF202O95125 648 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 RFC4P35249 363 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 FAM84BQ96KN1 310 aaPredicted RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 C16orf45Q96MC5 204 aaPredicted RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 CDKL5O76039 1030 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 SLC3A2P08195 630 aaKnown RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 PFKFB1P16118 471 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
PDE6C-201ENST00000371447 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
PDE6C-201ENST00000371447 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 LMOD1P29536 600 aaPredicted RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 STX1AQ16623 288 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 TRMT1Q9NXH9 659 aaKnown RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 TNKSO95271 1327 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 SLIT2O94813 1529 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 ABCC6O95255 1503 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 GRIN1Q05586 938 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 BCL2L12Q9HB09 334 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
PDE6C-201ENST00000371447 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 UTRNP46939 3433 aa13.6□□□□□ -0.23
PDE6C-201ENST00000371447 ZNF75DP51815 510 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 PNOCQ13519 176 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDE6C-201ENST00000371447 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 TMEM87BQ96K49 555 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 KRT23Q9C075 422 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
PDE6C-201ENST00000371447 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 FOXN1O15353 648 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 SYKP43405 635 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 DIXDC1Q155Q3 683 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 CEP57L1Q8IYX8 460 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 KCNG4Q8TDN1 519 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 MROH7-TTC4A0A0A0MT08 1334 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
PDE6C-201ENST00000371447 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
PDE6C-201ENST00000371447 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
PDE6C-201ENST00000371447 FMR1NBQ8N0W7 255 aaPredicted RBP13.59□□□□□ -0.23
PDE6C-201ENST00000371447 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.23
PDE6C-201ENST00000371447 MECOMQ03112 1051 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
PDE6C-201ENST00000371447 ENGASEQ8NFI3 743 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
PDE6C-201ENST00000371447 UBR2Q8IWV8 1755 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 ITGB4P16144 1822 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 NFIXQ14938 502 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 IFIT1BQ5T764 474 aaKnown RBP13.58□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF512BQ96KM6 892 aaPredicted RBP13.58□□□□□ -0.24
PDE6C-201ENST00000371447 ANO10Q9NW15 660 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 MCM9Q9NXL9 1143 aa13.58□□□□□ -0.24
PDE6C-201ENST00000371447 FANCBQ8NB91 859 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 ESR2Q92731 530 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 STAMQ92783 540 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 EVCP57679 992 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
PDE6C-201ENST00000371447 ZNF384Q8TF68 577 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 AK7Q96M32 723 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 CNNM2Q9H8M5 875 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
PDE6C-201ENST00000371447 MYO5AQ9Y4I1 1855 aaKnown RBP13.57□□□□□ -0.24
PDE6C-201ENST00000371447 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 NTRK3Q16288 839 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 BRAPQ7Z569 592 aa13.57□□□□□ -0.24
PDE6C-201ENST00000371447 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
PDE6C-201ENST00000371447 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDE6C-201ENST00000371447 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
PDE6C-201ENST00000371447 KIAA1468Q9P260 1216 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 PCDHB6Q9Y5E3 794 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 COBLO75128 1261 aa13.56□□□□□ -0.24
PDE6C-201ENST00000371447 CASP1P29466 404 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms