RNA–Protein interactions for RNA: ENST00000370508.5

GOT1-201, Transcript of glutamic-oxaloacetic transaminase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOT1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOT1-201ENST00000370508 PDE4BQ07343 736 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 TNRC6CQ9HCJ0 1690 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 NEDD4P46934 1319 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 GOLGA8AA7E2F4 631 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 CALM1P0DP23 149 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 CALM2P0DP24 149 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 CALM3P0DP25 149 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 GNL2Q13823 731 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
GOT1-201ENST00000370508 TMEM63CQ9P1W3 806 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
GOT1-201ENST00000370508 STK36Q9NRP7 1315 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 SYCE3A1L190 88 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 NPR1P16066 1061 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 XBP1P17861 261 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 MSNP26038 577 aaKnown RBP12.97□□□□□ -0.33
GOT1-201ENST00000370508 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
GOT1-201ENST00000370508 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 RESTQ13127 1097 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
GOT1-201ENST00000370508 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
GOT1-201ENST00000370508 CHD4Q14839 1912 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 PRKAB2O43741 272 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 MICU3Q86XE3 530 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 FBXO18Q8NFZ0 1043 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 ZMYND15Q9H091 742 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
GOT1-201ENST00000370508 NID2Q14112 1375 aa12.96□□□□□ -0.33
GOT1-201ENST00000370508 TAF1P21675 1872 aa12.96□□□□□ -0.34
GOT1-201ENST00000370508 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.34
GOT1-201ENST00000370508 AKAP17AQ02040 695 aaKnown RBP12.96□□□□□ -0.34
GOT1-201ENST00000370508 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.34
GOT1-201ENST00000370508 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.34
GOT1-201ENST00000370508 SBK1Q52WX2 424 aa12.96□□□□□ -0.34
GOT1-201ENST00000370508 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.34
GOT1-201ENST00000370508 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.34
GOT1-201ENST00000370508 HPS5Q9UPZ3 1129 aa12.96□□□□□ -0.34
GOT1-201ENST00000370508 SUGT1Q9Y2Z0 365 aa12.96□□□□□ -0.34
GOT1-201ENST00000370508 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 GADD45BO75293 160 aaPredicted RBP12.95□□□□□ -0.34
GOT1-201ENST00000370508 PRDX5P30044 214 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 USP5P45974 858 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 RTN1Q16799 776 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 LEO1Q8WVC0 666 aaPredicted RBP12.95□□□□□ -0.34
GOT1-201ENST00000370508 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
GOT1-201ENST00000370508 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
GOT1-201ENST00000370508 COL4A1P02462 1669 aa12.95□□□□□ -0.34
GOT1-201ENST00000370508 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 C6orf229H3BNL8 230 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 ORC4O43929 436 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 IL1R1P14778 569 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 KLRK1P26718 216 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 GPSM2P81274 684 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 JMYQ8N9B5 988 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 TCHHQ07283 1943 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 FGRP09769 529 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 IFNAR1P17181 557 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 DDR1Q08345 913 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 ZSCAN10Q96SZ4 725 aaPredicted RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 EYA3Q99504 573 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
GOT1-201ENST00000370508 ATP6V0A2Q9Y487 856 aa12.94□□□□□ -0.34
GOT1-201ENST00000370508 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 USP17L21D6R901 530 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 G3V3G9 751 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 CTAGE5O15320 804 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 ZNF500O60304 480 aaPredicted RBP12.93□□□□□ -0.34
GOT1-201ENST00000370508 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
GOT1-201ENST00000370508 PPP4CP60510 307 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms