RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CHCHD4Q8N4Q1 142 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 NKX2-3Q8TAU0 364 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 ADAMTS19Q8TE59 1207 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 DPF2Q92785 391 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 OTUD5Q96G74 571 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 NAP1L4Q99733 375 aaKnown RBP5.96□□□□□ -1.46
UBE3D-202ENST00000369746 TACO1Q9BSH4 297 aaKnown RBP5.96□□□□□ -1.46
UBE3D-202ENST00000369746 ANTXR1Q9H6X2 564 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 PRDM6Q9NQX0 595 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 INTUQ9ULD6 942 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 ANKRD36CQ5JPF3 1778 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 TMEM265A0A087WTH1 108 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 KLHL33A6NCF5 533 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 ANKRD33BA6NCL7 494 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 TRIM6-TRIM34B2RNG4 842 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 HMMRO75330 724 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 CASQ1P31415 396 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 SCNN1AP37088 669 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 GTF2A1P52655 376 aaPredicted RBP5.96□□□□□ -1.46
UBE3D-202ENST00000369746 EIF6P56537 245 aaKnown RBP5.96□□□□□ -1.46
UBE3D-202ENST00000369746 C11orf91Q3C1V1 193 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 PAF1Q8N7H5 531 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 PANK2Q9BZ23 570 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 PPCSQ9HAB8 311 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 TMEM63CQ9P1W3 806 aa5.96□□□□□ -1.46
UBE3D-202ENST00000369746 R3HCC1Q9Y3T6 440 aaKnown RBP5.96□□□□□ -1.46
UBE3D-202ENST00000369746 COL15A1P39059 1388 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 ZPR1O75312 459 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 FGAP02671 866 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 ATICP31939 592 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 MCM4P33991 863 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 PLA2G5P39877 138 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 CD151P48509 253 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 RGMBQ6NW40 437 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 CCDC174Q6PII3 467 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 PHC3Q8NDX5 983 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 CFAP53Q96M91 514 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 IER2Q9BTL4 223 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 HOXA10P31260 410 aaPredicted RBP5.95□□□□□ -1.46
UBE3D-202ENST00000369746 IARSP41252 1262 aaKnown RBP5.95□□□□□ -1.46
UBE3D-202ENST00000369746 TNNI2P48788 182 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 RAD51AP2Q09MP3 1159 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 SREBF2Q12772 1141 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 KIAA1958Q8N8K9 716 aa5.95□□□□□ -1.46
UBE3D-202ENST00000369746 ABT1Q9ULW3 272 aaKnown RBP5.95□□□□□ -1.46
UBE3D-202ENST00000369746 MTA2O94776 668 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 SERPINB2P05120 415 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 RBP3P10745 1247 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 ABCD1P33897 745 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 ST5P78524 1137 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 PODNQ7Z5L7 613 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 RNASEH2AO75792 299 aaKnown RBP5.94□□□□□ -1.46
UBE3D-202ENST00000369746 FOSP01100 380 aaPredicted RBP5.94□□□□□ -1.46
UBE3D-202ENST00000369746 HOXD11P31277 338 aaPredicted RBP5.94□□□□□ -1.46
UBE3D-202ENST00000369746 WASHC5Q12768 1159 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 RELL1Q8IUW5 271 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 PDLIM2Q96JY6 352 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 SLX1AQ9BQ83 275 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 RNF186Q9NXI6 227 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 PAXBP1Q9Y5B6 917 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 LAMB4A4D0S4 1761 aa5.94□□□□□ -1.46
UBE3D-202ENST00000369746 CCDC196A0A1B0GTZ2 297 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 CTAGE5O15320 804 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 SLFN14P0C7P3 912 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 SRGNP10124 158 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 CLK1P49759 484 aaKnown RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 GSCP56915 257 aaPredicted RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 AMPD3Q01432 767 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 MUM1L1Q5H9M0 696 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 INTS5Q6P9B9 1019 aaKnown RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 SLF2Q8IX21 1173 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 TSC1Q92574 1164 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 NELL1Q92832 810 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 GNEQ9Y223 722 aaKnown RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 LZTS1Q9Y250 596 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 AKAP2Q9Y2D5 859 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 IL6STP40189 918 aaPredicted RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 PEX19P40855 299 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 AMPHP49418 695 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 TNIP1Q15025 636 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 PLEKHO1Q53GL0 409 aaPredicted RBP5.93□□□□□ -1.46
UBE3D-202ENST00000369746 CST9Q5W186 159 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 USP48Q86UV5 1035 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 ANKRD7Q92527 254 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 ERO1AQ96HE7 468 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 FMNL2Q96PY5 1086 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 CRAMP1Q96RY5 1269 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 TINF2Q9BSI4 451 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 TMCC3Q9ULS5 477 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 CEMIPQ8WUJ3 1361 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 SLX4Q8IY92 1834 aa5.93□□□□□ -1.46
UBE3D-202ENST00000369746 TNFRSF10BO14763 440 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 NPHP1O15259 732 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 HSPA5P11021 654 aaKnown RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 CRKLP46109 303 aaKnown RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 PPP2R5BQ15173 497 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms