RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 NOGQ13253 232 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 TLR1Q15399 786 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 ZNF622Q969S3 477 aaKnown RBP eCLIP8.37□□□□□ -1.071e-7■□□□□ 9.8
ECHDC1-202ENST00000368289 TESK2Q96S53 571 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 CSRNP1Q96S65 589 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 ZSCAN10Q96SZ4 725 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 GLIS2Q9BZE0 524 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 ZMIZ1Q9ULJ6 1067 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 ZNF831Q5JPB2 1677 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 A6NJY4 79 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 TTLL8A6PVC2 850 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 GAS2L2Q8NHY3 880 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 CCDC136Q96JN2 1154 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 PRDM6Q9NQX0 595 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 HRH3Q9Y5N1 445 aa8.36□□□□□ -1.07
ECHDC1-202ENST00000368289 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 EN2P19622 333 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 MTFR1Q15390 333 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 TMEM214Q6NUQ4 689 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 GPC2Q8N158 579 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 ZNF296Q8WUU4 475 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 CHMP3Q9Y3E7 222 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 SNED1Q8TER0 1413 aa8.35□□□□□ -1.07
ECHDC1-202ENST00000368289 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 CTSOP43234 321 aaPredicted RBP8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 BICDL1Q6ZP65 573 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 RETREG2Q8NC44 543 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 PGAP2Q9UHJ9 254 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 NCAPD2Q15021 1401 aa8.34□□□□□ -1.07
ECHDC1-202ENST00000368289 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 TCERG1O14776 1098 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 PHKG2P15735 406 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 AMPHP49418 695 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 PKN2Q16513 984 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 B4GALNT3Q6L9W6 998 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 SLC12A5Q9H2X9 1139 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 R3HDMLQ9H3Y0 253 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 SCHIP1Q9P0W5 487 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 RCAN3Q9UKA8 241 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
ECHDC1-202ENST00000368289 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 MAN1A2O60476 641 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 SRGNP10124 158 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 RRP1P56182 461 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 HUNKP57058 714 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.32□□□□□ -1.087e-7■□□□□ 8.4
ECHDC1-202ENST00000368289 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 FOXD4L5Q5VV16 416 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 PRR5LQ6MZQ0 368 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 FBXO46Q6PJ61 603 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 RNF217Q8TC41 542 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 RHBDD1Q8TEB9 315 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 CLP1Q92989 425 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 BRIP1Q9BX63 1249 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 PANK3Q9H999 370 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 KNSTRNQ9Y448 316 aa8.32□□□□□ -1.08
ECHDC1-202ENST00000368289 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 PAPPA2Q9BXP8 1791 aa8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 SPATA31C2B4DYI2 1134 aa8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 EPHA4P54764 986 aa8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 USP50Q70EL3 339 aaPredicted RBP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 ZNF408Q9H9D4 720 aa8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.31□□□□□ -1.08
ECHDC1-202ENST00000368289 TJP1Q07157 1748 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 FIGNL2A6NMB9 653 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 TBC1D8O95759 1140 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 IGFBP4P22692 258 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 ANP32AP39687 249 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 IRX6P78412 446 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 RGMBQ6NW40 437 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 TAS1R3Q7RTX0 852 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 PRICKLE2Q7Z3G6 844 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
ECHDC1-202ENST00000368289 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-202ENST00000368289 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms