RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 ATP10DQ9P241 1426 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 IGSF22Q8N9C0 903 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 STAP2Q9UGK3 403 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 DKC1O60832 514 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 CCDC122Q5T0U0 273 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 GPAA1O43292 621 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 EPB41P11171 864 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 NLRP12P59046 1061 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 CCDC14Q49A88 953 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 CHMP4BP1P59074 171 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 GNA14O95837 355 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 FERP16591 822 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ISM2Q6H9L7 571 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 PLCD4Q9BRC7 762 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 MMRN2Q9H8L6 949 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 TOM1O60784 492 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 DNA2P51530 1060 aa13.5□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZNF500O60304 480 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 MCM7P33993 719 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 CCDC121Q6ZUS5 278 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 FBLN1P23142 703 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 ALDH3A1P30838 453 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 NCBP1Q09161 790 aaKnown RBP13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 TMED8Q6PL24 325 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 PPP1R14CQ8TAE6 165 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 NCAPD2Q15021 1401 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 USP19O94966 1318 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 SMTNP53814 917 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 CALCOCO2Q13137 446 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 PAK1Q13153 545 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 SYCE1Q8N0S2 351 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 MNAT1P51948 309 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 IFT20Q8IY31 132 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 UBL4BQ8N7F7 174 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 KCNA6P17658 529 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 NOX5Q96PH1 765 aa13.49□□□□□ -0.25
CDC42BPA-203ENST00000366766 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 MBD4O95243 580 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 POSTNQ15063 836 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 MRFAP1L1Q96HT8 127 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZNF569Q5MCW4 686 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 A0A1B0GVL5 298 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 SNX16P57768 344 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 FLOT1O75955 427 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 ARID4AP29374 1257 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 PTCH1Q13635 1447 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
CDC42BPA-203ENST00000366766 ITGA6P23229 1130 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZSWIM4Q9H7M6 989 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 MADDQ8WXG6 1647 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 XAGE2Q96GT9 111 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 SAMD15Q9P1V8 674 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 FANCCQ00597 558 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 PPFIA1Q13136 1202 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 SEL1L2Q5TEA6 688 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 PHACTR2O75167 634 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 UBE4AQ14139 1066 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 GLI2P10070 1586 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 LIG1P18858 919 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 ATP6V0A2Q9Y487 856 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 EVCP57679 992 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 SLC9C1Q4G0N8 1177 aa13.47□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms