RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 PPP1R13BQ96KQ4 1090 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 A0A087WUV0 522 aaPredicted RBP11.16□□□□□ -0.62
TRIM9-203ENST00000360392 EFCAB8A8MWE9 144 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 LDHAL6AQ6ZMR3 332 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 OTUD6BQ8N6M0 293 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 LRRN4CLQ8ND94 238 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 MST1RQ04912 1400 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 PCDH11XQ9BZA7 1347 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 PCDH11YQ9BZA8 1340 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
TRIM9-203ENST00000360392 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
TRIM9-203ENST00000360392 HLFQ16534 295 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 METTL24Q5JXM2 366 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 SMIM5Q71RC9 77 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 GPR161Q8N6U8 529 aaKnown RBP11.16□□□□□ -0.62
TRIM9-203ENST00000360392 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
TRIM9-203ENST00000360392 CLIC4Q9Y696 253 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 CAPN7Q9Y6W3 813 aa11.16□□□□□ -0.62
TRIM9-203ENST00000360392 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 NCAPD2Q15021 1401 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 SLIT3O75094 1523 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 H2AFXP16104 143 aaPredicted RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 CLNS1AP54105 237 aaKnown RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 NSUN7Q8NE18 718 aaKnown RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 PIGBQ92521 554 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 PARD6BQ9BYG5 372 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 TRMT112Q9UI30 125 aaKnown RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 PRC1O43663 620 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 ZNF202O95125 648 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 CCT5P48643 541 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 FANCCQ00597 558 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
TRIM9-203ENST00000360392 GBP3Q9H0R5 595 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 VEZTQ9HBM0 779 aa11.15□□□□□ -0.62
TRIM9-203ENST00000360392 WDR17Q8IZU2 1322 aa11.15□□□□□ -0.63
TRIM9-203ENST00000360392 ATP5JP18859 108 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 IFIT5Q13325 482 aaKnown RBP11.14□□□□□ -0.63
TRIM9-203ENST00000360392 SAFBQ15424 915 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM9-203ENST00000360392 WWC2Q6AWC2 1192 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 CACNA1FO60840 1977 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 E7EWF7 191 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 ZNF213O14771 459 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
TRIM9-203ENST00000360392 FOXO4P98177 505 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 RASSF8Q8NHQ8 419 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 HOOK1Q9UJC3 728 aaKnown RBP11.14□□□□□ -0.63
TRIM9-203ENST00000360392 GCKP35557 465 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 SCARF1Q14162 830 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 PRPF38AQ8NAV1 312 aaKnown RBP11.14□□□□□ -0.63
TRIM9-203ENST00000360392 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
TRIM9-203ENST00000360392 EYA2O00167 538 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 MAP2K1Q02750 393 aaPredicted RBP11.13□□□□□ -0.63
TRIM9-203ENST00000360392 IQCB1Q15051 598 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
TRIM9-203ENST00000360392 BICDL1Q6ZP65 573 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 LRP10Q7Z4F1 713 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 GDAP1L1Q96MZ0 367 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 A0A1B0GUA9 196 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ATP8B1O43520 1251 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 PFKFB2O60825 505 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ATP1A3P13637 1013 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 TTC19Q6DKK2 380 aaPredicted RBP11.13□□□□□ -0.63
TRIM9-203ENST00000360392 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ATG9AQ7Z3C6 839 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 AFAP1L1Q8TED9 768 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 FAM204AQ9H8W3 233 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 SCP2P22307 547 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 ZAP70P43403 619 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 RCOR1Q9UKL0 485 aa11.13□□□□□ -0.63
TRIM9-203ENST00000360392 AP1ARQ63HQ0 302 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 ATP2C2O75185 946 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 STARD3NLO95772 234 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 PNOCQ13519 176 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 STOX1Q6ZVD7 989 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 PPFIBP1Q86W92 1011 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
TRIM9-203ENST00000360392 CCDC24Q8N4L8 307 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms