RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 KCNH3Q9ULD8 1083 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 MYO6Q9UM54 1294 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
CNOT3-202ENST00000358389 PDE4BQ07343 736 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 RBL2Q08999 1139 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
CNOT3-202ENST00000358389 ARHGEF10O15013 1369 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 RPS6KA5O75582 802 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.33
CNOT3-202ENST00000358389 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 RAD9BQ6WBX8 426 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.33
CNOT3-202ENST00000358389 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 MYO1FO00160 1098 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 KCNQ3O43525 872 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 ATP2C2O75185 946 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 CABS1Q96KC9 395 aa12.96□□□□□ -0.33
CNOT3-202ENST00000358389 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
CNOT3-202ENST00000358389 TEX33O43247 280 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 IPO7O95373 1038 aaKnown RBP12.96□□□□□ -0.34
CNOT3-202ENST00000358389 SCP2P22307 547 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 ATP1A2P50993 1020 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 WHAMMP3Q1A5X7 153 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 BRAPQ7Z569 592 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.34
CNOT3-202ENST00000358389 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.34
CNOT3-202ENST00000358389 COBLO75128 1261 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 TUBBP07437 444 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 TMEM139Q8IV31 216 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 N4BP2L2Q92802 583 aaPredicted RBP12.95□□□□□ -0.34
CNOT3-202ENST00000358389 E7EWF7 191 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 MCM3P25205 808 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 TUBB4BP68371 445 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 MRPS25P82663 173 aaKnown RBP12.95□□□□□ -0.34
CNOT3-202ENST00000358389 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
CNOT3-202ENST00000358389 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
CNOT3-202ENST00000358389 CNPY4Q8N129 248 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 ALG1Q9BT22 464 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 INTS13Q9NVM9 706 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 ACEP12821 1306 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 GRM8O00222 908 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 CASP14P31944 242 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 AFMP43652 599 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
CNOT3-202ENST00000358389 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 MSANTD4Q8NCY6 345 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
CNOT3-202ENST00000358389 SRGAP2O75044 1071 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 CD248Q9HCU0 757 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 IRAK1P51617 712 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 ACTN3Q08043 901 aaPredicted RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 KIAA1328Q86T90 577 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 ZCCHC11Q5TAX3 1644 aaKnown RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 N4BP3O15049 544 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 POLR2DO15514 142 aaKnown RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 USP5P45974 858 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 KIF28PB7ZC32 967 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 CDC27P30260 824 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 CABP4P57796 275 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 TFCP2Q12800 502 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 TOM1L2Q6ZVM7 507 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
CNOT3-202ENST00000358389 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.94□□□□□ -0.34
CNOT3-202ENST00000358389 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 KIF1CO43896 1103 aaKnown RBP12.93□□□□□ -0.34
CNOT3-202ENST00000358389 FDPSP14324 419 aaKnown RBP12.93□□□□□ -0.34
CNOT3-202ENST00000358389 TTC39AQ5SRH9 613 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 SLC39A14Q15043 492 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 TUBB2BQ9BVA1 445 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
CNOT3-202ENST00000358389 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 PDCLQ13371 301 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 ODF2LQ9ULJ1 636 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 HPCAL4Q9UM19 191 aa12.93□□□□□ -0.34
CNOT3-202ENST00000358389 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 PRC1O43663 620 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 NEDD9Q14511 834 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 PTPRMP28827 1452 aa12.92□□□□□ -0.34
CNOT3-202ENST00000358389 SYF2O95926 243 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
CNOT3-202ENST00000358389 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms