RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 IGDCC4Q8TDY8 1250 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 UTP14AQ9BVJ6 771 aaKnown RBP9.53□□□□□ -0.88
CD46-205ENST00000358170 LY9Q9HBG7 655 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
CD46-205ENST00000358170 CRYBG1Q9Y4K1 1723 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 A0A1W2PQ27 194 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 A0A1W2PQ64 194 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 A0A1W2PQD8 194 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 FAM205CA6NFA0 338 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 TMEM232C9JQI7 657 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 NLRP12P59046 1061 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 UBE3CQ15386 1083 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 USP49Q70CQ1 688 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.88
CD46-205ENST00000358170 VPS54Q9P1Q0 977 aa9.52□□□□□ -0.88
CD46-205ENST00000358170 COL5A2P05997 1499 aaPredicted RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 NRDCO43847 1150 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 DYNLL1P63167 89 aaKnown RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 NCBP1Q09161 790 aaKnown RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.52□□□□□ -0.89
CD46-205ENST00000358170 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 CCZ1BP86790 482 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 CCZ1P86791 482 aaPredicted RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 ARMCX5Q6P1M9 558 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 NBPF11Q86T75 865 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 CCAR2Q8N163 923 aaKnown RBP9.52□□□□□ -0.89
CD46-205ENST00000358170 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
CD46-205ENST00000358170 SOS2Q07890 1332 aaPredicted RBP9.51□□□□□ -0.89
CD46-205ENST00000358170 TRPM3Q9HCF6 1732 aaPredicted RBP9.51□□□□□ -0.89
CD46-205ENST00000358170 KCNQ2O43526 872 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 EVX2Q03828 476 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 CHRNDQ07001 517 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 ELF2Q15723 593 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 KIF18AQ8NI77 898 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 DHX58Q96C10 678 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 TFCP2L1Q9NZI6 479 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 DNAI1Q9UI46 699 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 FAM182BQ5T319 152 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 SARM1Q6SZW1 724 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
CD46-205ENST00000358170 VGLL2Q8N8G2 317 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
CD46-205ENST00000358170 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
CD46-205ENST00000358170 ARFGEF2Q9Y6D5 1785 aa9.51□□□□□ -0.89
CD46-205ENST00000358170 TOP1P11387 765 aaKnown RBP9.5□□□□□ -0.89
CD46-205ENST00000358170 EVCP57679 992 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 DDB1Q16531 1140 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 CCDC152Q4G0S7 254 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 ADGRA1Q86SQ6 560 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 TMEM87BQ96K49 555 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 PKNOX2Q96KN3 472 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 USP54Q70EL1 1684 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 MRC1P22897 1456 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 RIC1Q4ADV7 1423 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 PRR29P0C7W0 189 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 PDE4BQ07343 736 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 ZNF174Q15697 407 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 NOSTRINQ8IVI9 506 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 KRI1Q8N9T8 703 aaKnown RBP9.5□□□□□ -0.89
CD46-205ENST00000358170 NMT2O60551 498 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 URI1O94763 535 aaPredicted RBP9.5□□□□□ -0.89
CD46-205ENST00000358170 ADKP55263 362 aaKnown RBP9.5□□□□□ -0.89
CD46-205ENST00000358170 SMYD4Q8IYR2 804 aaPredicted RBP9.5□□□□□ -0.89
CD46-205ENST00000358170 CCDC87Q9NVE4 849 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 PAXBP1Q9Y5B6 917 aa9.5□□□□□ -0.89
CD46-205ENST00000358170 SIPA1L3O60292 1781 aaPredicted RBP9.49□□□□□ -0.89
CD46-205ENST00000358170 TCRBV5S4A2TA0A5A2 114 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 GSDMDP57764 484 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 MYL5Q02045 173 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 NTRK3Q16288 839 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
CD46-205ENST00000358170 E4F1Q66K89 784 aaPredicted RBP9.49□□□□□ -0.89
CD46-205ENST00000358170 METTL16Q86W50 562 aaKnown RBP9.49□□□□□ -0.89
CD46-205ENST00000358170 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 MROH5Q6ZUA9 1318 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 LOC102724428A0A0B4J2F2 783 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 PES1O00541 588 aaKnown RBP9.49□□□□□ -0.89
CD46-205ENST00000358170 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
CD46-205ENST00000358170 SIK1P57059 783 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 PPARAQ07869 468 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 NCAPHQ15003 741 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 ERCC6LQ2NKX8 1250 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 FANCBQ8NB91 859 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 LRRN4CLQ8ND94 238 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 EPSTI1Q96J88 318 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 KRT23Q9C075 422 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 ZSWIM4Q9H7M6 989 aa9.49□□□□□ -0.89
CD46-205ENST00000358170 MAPK8IP1Q9UQF2 711 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms