RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TNFAIP3P21580 790 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 SPOPO43791 374 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 ARL1P40616 181 aaPredicted RBP16.6■□□□□ 0.25
CHD4-201ENST00000357008 LMNTD2Q8IXW0 634 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 EYA1Q99502 592 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 NDC80O14777 642 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 PAK2Q13177 524 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 CFAP157Q5JU67 520 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 HELBQ8NG08 1087 aaPredicted RBP16.6■□□□□ 0.25
CHD4-201ENST00000357008 NPC1L1Q9UHC9 1359 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
CHD4-201ENST00000357008 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.6■□□□□ 0.25
CHD4-201ENST00000357008 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
CHD4-201ENST00000357008 FYB2Q5VWT5 728 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 CADPS2Q86UW7 1296 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 CEBPAP49715 358 aaPredicted RBP16.59■□□□□ 0.25
CHD4-201ENST00000357008 ASIC2Q16515 512 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 CABS1Q96KC9 395 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 EYA2O00167 538 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 CCDC14Q49A88 953 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 KIFAP3Q92845 792 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
CHD4-201ENST00000357008 PCK1P35558 622 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
CHD4-201ENST00000357008 APPBP2Q92624 585 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 FAM227BQ96M60 508 aa16.59■□□□□ 0.25
CHD4-201ENST00000357008 F8W031 263 aaPredicted RBP16.58■□□□□ 0.25
CHD4-201ENST00000357008 ATP6V1AP38606 617 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 MAGEA1P43355 309 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 RPGRIP1Q96KN7 1286 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.25
CHD4-201ENST00000357008 MTX1Q13505 466 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 NEDD9Q14511 834 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 POSTNQ15063 836 aa16.58■□□□□ 0.25
CHD4-201ENST00000357008 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 BRD3Q15059 726 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.243e-9■■■□□ 16.2
CHD4-201ENST00000357008 MAPK8IP1Q9UQF2 711 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 CETN3O15182 167 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 TAOK1Q7L7X3 1001 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 INSRP06213 1382 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 PLCH2O75038 1416 aa16.58■□□□□ 0.24
CHD4-201ENST00000357008 TIMM10P62072 90 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 TTC38Q5R3I4 469 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 HOXB7P09629 217 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 RNASE9P60153 205 aaKnown RBP16.57■□□□□ 0.24
CHD4-201ENST00000357008 CLUL1Q15846 466 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 DCAF5Q96JK2 942 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
CHD4-201ENST00000357008 RIMS2Q9UQ26 1411 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
CHD4-201ENST00000357008 GBP1P32455 592 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 DBNDD2Q9BQY9 259 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
CHD4-201ENST00000357008 SEPT6Q14141 434 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 PPP2R5BQ15173 497 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 OTUD7BQ6GQQ9 843 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
CHD4-201ENST00000357008 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
CHD4-201ENST00000357008 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 CLNS1AP54105 237 aaKnown RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 SND1Q7KZF4 910 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHD4-201ENST00000357008 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 TAB2Q9NYJ8 693 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 CPSF2Q9P2I0 782 aaKnown RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 COL17A1Q9UMD9 1497 aaPredicted RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 TNRQ92752 1358 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 PLS1Q14651 629 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 ZNF354CQ86Y25 554 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 CCDC51Q96ER9 411 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 MAK16Q9BXY0 300 aaKnown RBP16.56■□□□□ 0.24
CHD4-201ENST00000357008 CEP85LQ5SZL2 805 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 KRT40Q6A162 431 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
CHD4-201ENST00000357008 WDR66Q8TBY9 1149 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 ABCC1P33527 1531 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 CEP104O60308 925 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 CCDC84Q86UT8 332 aaPredicted RBP16.55■□□□□ 0.24
CHD4-201ENST00000357008 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 CALUO43852 315 aaPredicted RBP16.55■□□□□ 0.24
CHD4-201ENST00000357008 TPD52P55327 224 aaPredicted RBP16.55■□□□□ 0.24
CHD4-201ENST00000357008 ZSCAN26Q16670 478 aa16.55■□□□□ 0.24
CHD4-201ENST00000357008 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms