RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ANKRD18AQ8IVF6 992 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 LCORLQ8N3X6 602 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 CNTNAP4Q9C0A0 1308 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 RXRAP19793 462 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 U2AF2P26368 475 aaKnown RBP eCLIP25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 RCAN1P53805 252 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 UBE4AQ14139 1066 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 AXDND1Q5T1B0 1012 aaPredicted RBP25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 CLIP2Q9UDT6 1046 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 ZNF804BA4D1E1 1349 aa25.8■■□□□ 1.72
NKX2-1-201ENST00000354822 ERICH2A1L162 156 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 IFNAR1P17181 557 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 PHKBQ93100 1093 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 USP21Q9UK80 565 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 PYCARDQ9ULZ3 195 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 ZNF202O95125 648 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 FMNL1O95466 1100 aaPredicted RBP25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 HSP90AA2PQ14568 343 aaPredicted RBP25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 TIGD1Q96MW7 591 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 INCENPQ9NQS7 918 aa25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 BSDC1Q9NW68 430 aaPredicted RBP25.79■■□□□ 1.72
NKX2-1-201ENST00000354822 THSD7AQ9UPZ6 1657 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 PRKAB2O43741 272 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 DHX40Q8IX18 779 aaKnown RBP25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 AIFM3Q96NN9 605 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 BPIFA3Q9BQP9 254 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 CHD4Q14839 1912 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 CCDC196A0A1B0GTZ2 297 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 CYP7A1P22680 504 aa25.78■■□□□ 1.72
NKX2-1-201ENST00000354822 RANBP6O60518 1105 aaKnown RBP25.77■■□□□ 1.72
NKX2-1-201ENST00000354822 WTAPQ15007 396 aa25.77■■□□□ 1.72
NKX2-1-201ENST00000354822 CCDC144CPQ8IYA2 1237 aa25.77■■□□□ 1.72
NKX2-1-201ENST00000354822 SLC3A2P08195 630 aaKnown RBP25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 C17orf53Q8N3J3 647 aaPredicted RBP25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 MYRIPQ8NFW9 859 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 CAVIN4Q5BKX8 364 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 TRIM22Q8IYM9 498 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 SLC26A6Q9BXS9 759 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 ANAPC4Q9UJX5 808 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 TACC3Q9Y6A5 838 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 BTAF1O14981 1849 aa25.76■■□□□ 1.71
NKX2-1-201ENST00000354822 NEMFO60524 1076 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 ERFEQ4G0M1 354 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 TOMM22Q9NS69 142 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 NHSQ6T4R5 1651 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 PFKFB1P16118 471 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 PPARAQ07869 468 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 PPP2R5BQ15173 497 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 SAFBQ15424 915 aaKnown RBP eCLIP25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 RRP12Q5JTH9 1297 aaKnown RBP25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 SLC10A5Q5PT55 438 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 RC3H1Q5TC82 1133 aaKnown RBP25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 MIGA1Q8NAN2 632 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 MYL10Q9BUA6 226 aa25.75■■□□□ 1.71
NKX2-1-201ENST00000354822 MAGEB6P1A0A0J9YX57 407 aa25.74■■□□□ 1.71
NKX2-1-201ENST00000354822 PTPAQ15257 358 aa25.74■■□□□ 1.71
NKX2-1-201ENST00000354822 RTN1Q16799 776 aa25.74■■□□□ 1.71
NKX2-1-201ENST00000354822 NRBP1Q9UHY1 535 aa25.74■■□□□ 1.71
NKX2-1-201ENST00000354822 SCN7AQ01118 1682 aa25.74■■□□□ 1.71
NKX2-1-201ENST00000354822 FAM237AA0A1B0GTK4 181 aa25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 WDHD1O75717 1129 aaPredicted RBP25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 MAP3K14Q99558 947 aa25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 RAI14Q9P0K7 980 aa25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 ABCF2Q9UG63 623 aa25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 PTF1AQ7RTS3 328 aa25.73■■□□□ 1.71
NKX2-1-201ENST00000354822 MARCKSP29966 332 aaPredicted RBP25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 SYKP43405 635 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 KCNQ4P56696 695 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 NLRP12P59046 1061 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 HPSEQ9Y251 543 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 CHAF1AQ13111 956 aaPredicted RBP25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 AOPEPQ8N6M6 819 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 ESR2Q92731 530 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 UBAC1Q9BSL1 405 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 MINPP1Q9UNW1 487 aa25.72■■□□□ 1.71
NKX2-1-201ENST00000354822 SEMA3EO15041 775 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 CUTAO60888 179 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 DEXIO95424 95 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 GYG1P46976 350 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 GTF2E1P29083 439 aaPredicted RBP25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 TPM4P67936 248 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 NOSTRINQ8IVI9 506 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 MAP7D2Q96T17 732 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 NYXQ9GZU5 481 aa25.71■■□□□ 1.71
NKX2-1-201ENST00000354822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 SMTNL1A8MU46 457 aa25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 RPS6KA4O75676 772 aa25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 MMP1P03956 469 aa25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 PCP11498 1178 aaKnown RBP25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 ERCC4Q92889 916 aaPredicted RBP25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 PDCL3Q9H2J4 239 aa25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 FOXP1Q9H334 677 aaPredicted RBP25.7■■□□□ 1.7
NKX2-1-201ENST00000354822 GTF2F1P35269 517 aaKnown RBP eCLIP25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 RESP18Q5W5W9 173 aa25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 CRACR2BQ8N4Y2 399 aaPredicted RBP25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 FANCBQ8NB91 859 aa25.69■■□□□ 1.7
NKX2-1-201ENST00000354822 IQSEC3Q9UPP2 1182 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms