RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NOL10Q9BSC4 688 aaKnown RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 MTA3Q9BTC8 594 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 KRT23Q9C075 422 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
ECM1-201ENST00000346569 ZSWIM5Q9P217 1185 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 MYH2Q9UKX2 1941 aa12.97□□□□□ -0.33
ECM1-201ENST00000346569 B4E1Z4 1266 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 NFKBIEO00221 500 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 PCP11498 1178 aaKnown RBP12.96□□□□□ -0.33
ECM1-201ENST00000346569 YY1P25490 414 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 LARGE2Q8N3Y3 721 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 GMLQ99445 158 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
ECM1-201ENST00000346569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
ECM1-201ENST00000346569 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
ECM1-201ENST00000346569 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 F8W031 263 aaPredicted RBP12.96□□□□□ -0.34
ECM1-201ENST00000346569 PFKFB2O60825 505 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 USP17L8P0C7I0 530 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 PDIA3P30101 505 aaKnown RBP12.96□□□□□ -0.34
ECM1-201ENST00000346569 IARSP41252 1262 aaKnown RBP12.96□□□□□ -0.34
ECM1-201ENST00000346569 USP5P45974 858 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 SCNN1DP51172 638 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 EVX2Q03828 476 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 APOBRQ0VD83 1088 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 TEX11Q8IYF3 940 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 NECAB1Q8N987 351 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 TMEM87BQ96K49 555 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 ZDHHC15Q96MV8 337 aa12.96□□□□□ -0.34
ECM1-201ENST00000346569 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.34
ECM1-201ENST00000346569 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
ECM1-201ENST00000346569 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
ECM1-201ENST00000346569 ORC4O43929 436 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 KDM4AO75164 1064 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 CYP2D6P10635 497 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 LIFRP42702 1097 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 CRKP46108 304 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 RAB3GAP1Q15042 981 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 KIAA0825Q8IV33 1275 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 TEKT1Q969V4 418 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 MCM9Q9NXL9 1143 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
ECM1-201ENST00000346569 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 COL4A5P29400 1685 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
ECM1-201ENST00000346569 PSMD14O00487 310 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 SH2B2O14492 632 aaPredicted RBP12.94□□□□□ -0.34
ECM1-201ENST00000346569 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
ECM1-201ENST00000346569 NUCB2P80303 420 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 FGD1P98174 961 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
ECM1-201ENST00000346569 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 ANGEL1Q9UNK9 670 aaKnown RBP12.94□□□□□ -0.34
ECM1-201ENST00000346569 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
ECM1-201ENST00000346569 RAD17O75943 681 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 NT5C2P49902 561 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 PLCD1P51178 756 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 SCRN1Q12765 414 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 SGMS1Q86VZ5 419 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 ESR2Q92731 530 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
ECM1-201ENST00000346569 BAZ2AQ9UIF9 1905 aaKnown RBP12.93□□□□□ -0.34
ECM1-201ENST00000346569 FLT1P17948 1338 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 CXCL9Q07325 125 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 STK3Q13188 491 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 PKP1Q13835 747 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 SEC23AQ15436 765 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 RRP12Q5JTH9 1297 aaKnown RBP12.92□□□□□ -0.34
ECM1-201ENST00000346569 NIM1KQ8IY84 436 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 STK11IPQ8N1F8 1099 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 TMTC2Q8N394 836 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 LLPHQ9BRT6 129 aaKnown RBP12.92□□□□□ -0.34
ECM1-201ENST00000346569 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 DDX4Q9NQI0 724 aaKnown RBP12.92□□□□□ -0.34
ECM1-201ENST00000346569 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
ECM1-201ENST00000346569 IFIT3O14879 490 aaKnown RBP12.91□□□□□ -0.34
ECM1-201ENST00000346569 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
ECM1-201ENST00000346569 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 BRD1O95696 1058 aa12.91□□□□□ -0.34
ECM1-201ENST00000346569 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
ECM1-201ENST00000346569 SLC3A2P08195 630 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms