RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
ATG4A-202ENST00000345734 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 PUS7LQ9H0K6 701 aaKnown RBP10.98□□□□□ -0.65
ATG4A-202ENST00000345734 DTNBO60941 627 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
ATG4A-202ENST00000345734 USP46P62068 366 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 MTMR2Q13614 643 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 RASGRF1Q13972 1273 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
ATG4A-202ENST00000345734 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 FOXP2O15409 715 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
ATG4A-202ENST00000345734 ADD2P35612 726 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 ME3Q16798 604 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 TPTE2Q6XPS3 522 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 APPBP2Q92624 585 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 TPCN1Q9ULQ1 816 aa10.97□□□□□ -0.65
ATG4A-202ENST00000345734 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
ATG4A-202ENST00000345734 ST3GAL1Q11201 340 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 TOB2Q14106 344 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-202ENST00000345734 KRT32Q14532 448 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 NFIXQ14938 502 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 TTF1Q15361 905 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-202ENST00000345734 SLC9C2Q5TAH2 1124 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 CLEC17AQ6ZS10 378 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 CCDC83Q8IWF9 413 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 NECAB1Q8N987 351 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.65
ATG4A-202ENST00000345734 BSDC1Q9NW68 430 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-202ENST00000345734 WWC3Q9ULE0 1092 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 MINPP1Q9UNW1 487 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 DOCK2Q92608 1830 aa10.96□□□□□ -0.65
ATG4A-202ENST00000345734 GPAA1O43292 621 aa10.96□□□□□ -0.66
ATG4A-202ENST00000345734 PUS10Q3MIT2 529 aaKnown RBP10.96□□□□□ -0.66
ATG4A-202ENST00000345734 VPS9D1Q9Y2B5 631 aa10.96□□□□□ -0.66
ATG4A-202ENST00000345734 ZNF532Q9HCE3 1301 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 PDE6AP16499 860 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 EMP3P54852 163 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-202ENST00000345734 LRRC2Q9BYS8 371 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 IQSEC3Q9UPP2 1182 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-202ENST00000345734 TCHHQ07283 1943 aa10.95□□□□□ -0.66
ATG4A-202ENST00000345734 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 NPHP1O15259 732 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 BRD1O95696 1058 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 TM4SF1P30408 202 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 GYG1P46976 350 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 RPS8P62241 208 aaKnown RBP10.94□□□□□ -0.66
ATG4A-202ENST00000345734 IRF5Q13568 498 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-202ENST00000345734 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-202ENST00000345734 CARMIL3Q8ND23 1372 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 E7EWF7 191 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 GPR37L1O60883 481 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 FGAP02671 866 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 HAND2P61296 217 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 RBM6P78332 1123 aaKnown RBP10.94□□□□□ -0.66
ATG4A-202ENST00000345734 UBE3CQ15386 1083 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 Q6ZUG5 572 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 SLC51AQ86UW1 340 aa10.94□□□□□ -0.66
ATG4A-202ENST00000345734 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-202ENST00000345734 GYS1P13807 737 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 KLRK1P26718 216 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
ATG4A-202ENST00000345734 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 ANKRD1Q15327 319 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 MAGEB6Q8N7X4 407 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 GZF1Q9H116 711 aaPredicted RBP10.93□□□□□ -0.66
ATG4A-202ENST00000345734 SMC3Q9UQE7 1217 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 RRP9O43818 475 aaKnown RBP10.93□□□□□ -0.66
ATG4A-202ENST00000345734 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 STK3Q13188 491 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 TXNRD1Q16881 649 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
ATG4A-202ENST00000345734 CNBD1Q8NA66 436 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 PRM3Q9NNZ6 103 aa10.93□□□□□ -0.66
ATG4A-202ENST00000345734 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
ATG4A-202ENST00000345734 GJB2P29033 226 aa10.92□□□□□ -0.66
ATG4A-202ENST00000345734 MAP3K12Q12852 859 aa10.92□□□□□ -0.66
ATG4A-202ENST00000345734 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
ATG4A-202ENST00000345734 COL1A1P02452 1464 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-202ENST00000345734 GOLGA6L22H0YM25 854 aa10.91□□□□□ -0.66
ATG4A-202ENST00000345734 SYT1P21579 422 aa10.91□□□□□ -0.66
ATG4A-202ENST00000345734 EXOSC10Q01780 885 aaKnown RBP10.91□□□□□ -0.66
ATG4A-202ENST00000345734 PRR5LQ6MZQ0 368 aa10.91□□□□□ -0.66
ATG4A-202ENST00000345734 CHST3Q7LGC8 479 aa10.91□□□□□ -0.66
ATG4A-202ENST00000345734 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
ATG4A-202ENST00000345734 FAM84BQ96KN1 310 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms