RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 SSC5DA1L4H1 1573 aa8.77□□□□□ -1.01
GDNF-202ENST00000344622 CLRN2A0PK11 232 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
GDNF-202ENST00000344622 MAP3K12Q12852 859 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
GDNF-202ENST00000344622 SLC4A4Q9Y6R1 1079 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 FLT1P17948 1338 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 TTF1Q15361 905 aaPredicted RBP8.76□□□□□ -1.01
GDNF-202ENST00000344622 PHIPQ8WWQ0 1821 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 E7EWF7 191 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 GMPSP49915 693 aaPredicted RBP8.76□□□□□ -1.01
GDNF-202ENST00000344622 TCP10Q12799 353 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
GDNF-202ENST00000344622 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 USP17L21D6R901 530 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 C9orf131Q5VYM1 1079 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 RUFY3Q7L099 469 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 FAM163AQ96GL9 167 aaPredicted RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 ZKSCAN3Q9BRR0 538 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.75□□□□□ -1.01
GDNF-202ENST00000344622 MYH4Q9Y623 1939 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 UNC80Q8N2C7 3258 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 REV3LO60673 3130 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 ATRNL1Q5VV63 1379 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 PICALMQ13492 652 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 DZIP1Q86YF9 867 aaKnown RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 RAB11FIP4Q86YS3 637 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 UPF2Q9HAU5 1272 aaKnown RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 PKP1Q13835 747 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 TBC1D10BQ4KMP7 808 aaPredicted RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 DSCC1Q9BVC3 393 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 GNL3LQ9NVN8 582 aaKnown RBP8.75□□□□□ -1.01
GDNF-202ENST00000344622 RNF181Q9P0P0 153 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
GDNF-202ENST00000344622 SPDYE2BA6NHP3 402 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 SPDYE6P0CI01 402 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 CFAP100Q494V2 611 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 ZDHHC15Q96MV8 337 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 TMEM39BQ9GZU3 492 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 IL17RBQ9NRM6 502 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 TCHHQ07283 1943 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 CASTP20810 708 aaKnown RBP8.74□□□□□ -1.01
GDNF-202ENST00000344622 PPP4CP60510 307 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 DGKZQ13574 1117 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
GDNF-202ENST00000344622 MICALL2Q8IY33 904 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 EYA3Q99504 573 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 LMNB1P20700 586 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 ZSWIM5Q9P217 1185 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 TPCN1Q9ULQ1 816 aa8.74□□□□□ -1.01
GDNF-202ENST00000344622 AK2P54819 239 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 EXOSC10Q01780 885 aaKnown RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 MB21D2Q8IYB1 491 aaPredicted RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 ZGPATQ8N5A5 531 aaKnown RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 TEPSINQ96N21 525 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 B4E1Z4 1266 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 ZFYP08048 801 aaPredicted RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 FAM47AQ5JRC9 791 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 ZSWIM6Q9HCJ5 1215 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 MYOZ2Q9NPC6 264 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 BRPF3Q9ULD4 1205 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 RXRAP19793 462 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 CCDC84Q86UT8 332 aaPredicted RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 NIM1KQ8IY84 436 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 SHISA4Q96DD7 197 aa8.73□□□□□ -1.01
GDNF-202ENST00000344622 JAKMIP1Q96N16 626 aaKnown RBP8.73□□□□□ -1.01
GDNF-202ENST00000344622 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
GDNF-202ENST00000344622 MINDY4BA8MYZ0 360 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 APPP05067 770 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 USP40Q9NVE5 1235 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 CNOT7Q9UIV1 285 aaKnown RBP8.72□□□□□ -1.01
GDNF-202ENST00000344622 TCP10L2B9ZVM9 353 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 VEGFAP15692 232 aaPredicted RBP8.72□□□□□ -1.01
GDNF-202ENST00000344622 GABPAQ06546 454 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 PPARAQ07869 468 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 CIAPIN1Q6FI81 312 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 HHIPL2Q6UWX4 724 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 MYL10Q9BUA6 226 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 PTPRFP10586 1907 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 ADAMTS3O15072 1205 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 REC8O95072 547 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 NEK4P51957 841 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 ZNF280AP59817 542 aaPredicted RBP8.72□□□□□ -1.01
GDNF-202ENST00000344622 GPR162Q16538 588 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 ME3Q16798 604 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 C12orf60Q5U649 245 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 RCSD1Q6JBY9 416 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 SIAH1Q8IUQ4 282 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 SERPINA10Q9UK55 444 aa8.72□□□□□ -1.01
GDNF-202ENST00000344622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
GDNF-202ENST00000344622 FGRP09769 529 aa8.71□□□□□ -1.01
GDNF-202ENST00000344622 MCM9Q9NXL9 1143 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms