RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 SLF2Q8IX21 1173 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 SEC62Q99442 399 aaKnown RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 LRRC27Q9C0I9 530 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 EXOC1Q9NV70 894 aa12.32□□□□□ -0.44
RPL28-201ENST00000344063 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
RPL28-201ENST00000344063 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 A1BGP04217 495 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 IDEP14735 1019 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 INO80Q9ULG1 1556 aaPredicted RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 ADCY9O60503 1353 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 DIS3L2Q8IYB7 885 aaKnown RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 DYDC1Q8WWB3 177 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 PPP1R13BQ96KQ4 1090 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 SCLT1Q96NL6 688 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 DBNLQ9UJU6 430 aaKnown RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 USP27XA6NNY8 438 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 ITGA6P23229 1130 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 AKR1B10O60218 316 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 PHKG2P15735 406 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 GBP6Q6ZN66 633 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 PDE11AQ9HCR9 933 aa12.31□□□□□ -0.44
RPL28-201ENST00000344063 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
RPL28-201ENST00000344063 KRT83P78385 493 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 IGSF22Q8N9C0 903 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
RPL28-201ENST00000344063 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
RPL28-201ENST00000344063 PRDM4Q9UKN5 801 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 PUM3Q15397 648 aaKnown RBP12.3□□□□□ -0.44
RPL28-201ENST00000344063 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 ZAP70P43403 619 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■□□□ 13.6
RPL28-201ENST00000344063 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.3□□□□□ -0.44
RPL28-201ENST00000344063 STX8Q9UNK0 236 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 NRXN1Q9ULB1 1477 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 SCRN1Q12765 414 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 CCDC40Q4G0X9 1142 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 MIGA1Q8NAN2 632 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 TLR7Q9NYK1 1049 aaKnown RBP12.3□□□□□ -0.44
RPL28-201ENST00000344063 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 NFE2L3Q9Y4A8 694 aa12.3□□□□□ -0.44
RPL28-201ENST00000344063 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 KRT86O43790 486 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 CYP21A2P08686 494 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 CDC25BP30305 580 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 PPP2R5BQ15173 497 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 E2F4Q16254 413 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPL28-201ENST00000344063 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 PNMA6AP0CW24 399 aaPredicted RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 ZNF76P36508 570 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 LIG3P49916 1009 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 TUBB2AQ13885 445 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 TUBB2BQ9BVA1 445 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 VPS16Q9H269 839 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 RRP15Q9Y3B9 282 aaKnown RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 RBM6P78332 1123 aaKnown RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 IFT81Q8WYA0 676 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 EPC1Q9H2F5 836 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 MACROD2A1Z1Q3 448 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 POLR2DO15514 142 aaKnown RBP12.29□□□□□ -0.44
RPL28-201ENST00000344063 PDE8AO60658 829 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 NEFHP12036 1026 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 CMA1P23946 247 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 PCDHA7Q9UN72 937 aa12.29□□□□□ -0.44
RPL28-201ENST00000344063 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPL28-201ENST00000344063 PFKFB1P16118 471 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
RPL28-201ENST00000344063 GSTO1P78417 241 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 PNOCQ13519 176 aa12.28□□□□□ -0.44
RPL28-201ENST00000344063 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
RPL28-201ENST00000344063 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms