RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 MASTLQ96GX5 879 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
TPM3-208ENST00000341485 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
TPM3-208ENST00000341485 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
TPM3-208ENST00000341485 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
TPM3-208ENST00000341485 IRS2Q9Y4H2 1338 aa17.5■□□□□ 0.39
TPM3-208ENST00000341485 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
TPM3-208ENST00000341485 SP8Q8IXZ3 490 aa17.5■□□□□ 0.39
TPM3-208ENST00000341485 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
TPM3-208ENST00000341485 PDS5AQ29RF7 1337 aaKnown RBP17.5■□□□□ 0.39
TPM3-208ENST00000341485 SASS6Q6UVJ0 657 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 C2CD5Q86YS7 1000 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■■□□□ 13.1
TPM3-208ENST00000341485 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
TPM3-208ENST00000341485 PODXL2Q9NZ53 605 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 COL11A2P13942 1736 aaPredicted RBP17.49■□□□□ 0.39
TPM3-208ENST00000341485 DHX16O60231 1041 aaKnown RBP17.49■□□□□ 0.39
TPM3-208ENST00000341485 APPP05067 770 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 CYP7A1P22680 504 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 TERF1P54274 439 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 C15orf52Q6ZUT6 534 aaKnown RBP17.49■□□□□ 0.39
TPM3-208ENST00000341485 CYB5R4Q7L1T6 521 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 CCDC125Q86Z20 511 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
TPM3-208ENST00000341485 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
TPM3-208ENST00000341485 C6orf229H3BNL8 230 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 MBD4O95243 580 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
TPM3-208ENST00000341485 STRBPQ96SI9 672 aaKnown RBP17.48■□□□□ 0.39
TPM3-208ENST00000341485 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 H0YIN7 160 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 TRDNQ13061 729 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 PIBF1Q8WXW3 757 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 DNAJC25Q9H1X3 360 aa17.48■□□□□ 0.39
TPM3-208ENST00000341485 SH2B2O14492 632 aaPredicted RBP17.47■□□□□ 0.39
TPM3-208ENST00000341485 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
TPM3-208ENST00000341485 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
TPM3-208ENST00000341485 TDRD7Q8NHU6 1098 aaKnown RBP17.47■□□□□ 0.39
TPM3-208ENST00000341485 ARMT1Q9H993 441 aa17.47■□□□□ 0.39
TPM3-208ENST00000341485 RTEL1Q9NZ71 1219 aa17.47■□□□□ 0.39
TPM3-208ENST00000341485 CPLX1O14810 134 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 MIGA1Q8NAN2 632 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 SPC24Q8NBT2 197 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
TPM3-208ENST00000341485 JAG2Q9Y219 1238 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 ZMYM6O95789 1325 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 ZBTB22O15209 634 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 ME1P48163 572 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 ALX1Q15699 326 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 PDGFDQ9GZP0 370 aaPredicted RBP17.46■□□□□ 0.39
TPM3-208ENST00000341485 KCNF1Q9H3M0 494 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 EPB41L4AQ9HCS5 686 aaPredicted RBP17.46■□□□□ 0.39
TPM3-208ENST00000341485 GJB4Q9NTQ9 266 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 POLLQ9UGP5 575 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
TPM3-208ENST00000341485 NEDD4P46934 1319 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 B4E1Z4 1266 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 CTAGE5O15320 804 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 GNAT2P19087 354 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 ZNF165P49910 485 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 FAM160A1Q05DH4 1040 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
TPM3-208ENST00000341485 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 FSIP1Q8NA03 581 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 SENP2Q9HC62 589 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 CACNA1SQ13698 1873 aa17.45■□□□□ 0.38
TPM3-208ENST00000341485 MAGEB6P1A0A0J9YX57 407 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
TPM3-208ENST00000341485 C17orf53Q8N3J3 647 aaPredicted RBP17.44■□□□□ 0.38
TPM3-208ENST00000341485 LCORLQ8N3X6 602 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 LINC00301Q8NCQ3 95 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 CHD4Q14839 1912 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 KIF28PB7ZC32 967 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
TPM3-208ENST00000341485 NOLC1Q14978 699 aaKnown RBP eCLIP17.44■□□□□ 0.38
TPM3-208ENST00000341485 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
TPM3-208ENST00000341485 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 KINO60870 393 aaKnown RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 TPM3P06753 285 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 METAP2P50579 478 aaKnown RBP eCLIP17.43■□□□□ 0.38
TPM3-208ENST00000341485 MYSM1Q5VVJ2 828 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 APOA5Q6Q788 366 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 C11orf57Q6ZUT1 292 aaPredicted RBP17.43■□□□□ 0.38
TPM3-208ENST00000341485 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 IGDCC4Q8TDY8 1250 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 SLC16A10Q8TF71 515 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 NAPBQ9H115 298 aa17.43■□□□□ 0.38
TPM3-208ENST00000341485 INCENPQ9NQS7 918 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms