RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 BAZ2AQ9UIF9 1905 aaKnown RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 ZNF500O60304 480 aaPredicted RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 FAM160A1Q05DH4 1040 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 PPARAQ07869 468 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 PDILTQ8N807 584 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 ZNF652Q9Y2D9 606 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
SNCA-201ENST00000336904 BECN2A8MW95 431 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 ZPR1O75312 459 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 NOLC1Q14978 699 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCA-201ENST00000336904 WTAPQ15007 396 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 ANO1Q5XXA6 986 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 GRAMD1CQ8IYS0 662 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 ENGASEQ8NFI3 743 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
SNCA-201ENST00000336904 GOLGA6L19H0YKK7 550 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 PFKFB1P16118 471 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 NFIXQ14938 502 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 NTRK3Q16288 839 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 GRIK5Q16478 980 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.77
SNCA-201ENST00000336904 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
SNCA-201ENST00000336904 USP21Q9UK80 565 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 USP17L21D6R901 530 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 VEGFAP15692 232 aaPredicted RBP10.27□□□□□ -0.77
SNCA-201ENST00000336904 EVCP57679 992 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 PNOCQ13519 176 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 DIXDC1Q155Q3 683 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 HS1BP3Q53T59 392 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 RASGRP2Q7LDG7 609 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 FMR1NBQ8N0W7 255 aaPredicted RBP10.27□□□□□ -0.77
SNCA-201ENST00000336904 UBAC1Q9BSL1 405 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 VPS54Q9P1Q0 977 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 CLIP2Q9UDT6 1046 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 TNKSO95271 1327 aa10.27□□□□□ -0.77
SNCA-201ENST00000336904 ZNF75DP51815 510 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 CAVIN4Q5BKX8 364 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 ZNF512BQ96KM6 892 aaPredicted RBP10.26□□□□□ -0.77
SNCA-201ENST00000336904 NACAP1Q9BZK3 213 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 RTEL1Q9NZ71 1219 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 ANKIB1Q9P2G1 1089 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 THRAP3Q9Y2W1 955 aaKnown RBP10.26□□□□□ -0.77
SNCA-201ENST00000336904 ADAMTS3O15072 1205 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 ZNF202O95125 648 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 MECOMQ03112 1051 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
SNCA-201ENST00000336904 TRIM29Q14134 588 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 RTN1Q16799 776 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 ZNF827Q17R98 1081 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 SHISA4Q96DD7 197 aa10.26□□□□□ -0.77
SNCA-201ENST00000336904 C16orf45Q96MC5 204 aaPredicted RBP10.26□□□□□ -0.77
SNCA-201ENST00000336904 WNT7AO00755 349 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 CASP1P29466 404 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 RPS8P62241 208 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 IQCB1Q15051 598 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 USP49Q70CQ1 688 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 DHX40Q8IX18 779 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 AHDC1Q5TGY3 1603 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 CICQ96RK0 1608 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 ERICH2A1L162 156 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 TOM1O60784 492 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 GOLGA8FQ08AF8 430 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 GOLGA8DPQ0D2H9 430 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 EARS2Q5JPH6 523 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 SHC4Q6S5L8 630 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 RBM43Q6ZSC3 357 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 ZNF654Q8IZM8 581 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 DYNLL2Q96FJ2 89 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 MYH2Q9UKX2 1941 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 MYH15Q9Y2K3 1946 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 COBLO75128 1261 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 ATRNO75882 1429 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 USP17L8P0C7I0 530 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 LMOD1P29536 600 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 STX1AQ16623 288 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 MEX3CQ5U5Q3 659 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 ADALQ6DHV7 355 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 NRAPQ86VF7 1730 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 SLC44A5Q8NCS7 719 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 CACTINQ8WUQ7 758 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 SMARCC1Q92922 1105 aaPredicted RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 RIOK1Q9BRS2 568 aaKnown RBP10.25□□□□□ -0.77
SNCA-201ENST00000336904 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
SNCA-201ENST00000336904 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 C4AP0C0L4 1744 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 C4BP0C0L5 1744 aa10.24□□□□□ -0.77
SNCA-201ENST00000336904 ZRSR1Q15695 479 aaKnown RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 ENAHQ8N8S7 591 aaPredicted RBP10.24□□□□□ -0.77
SNCA-201ENST00000336904 TMEM87BQ96K49 555 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms