RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 GMLQ99445 158 aa27.55■■■□□ 2
TSEN54-201ENST00000333213 MRIQ9BWK5 157 aa27.55■■■□□ 2
TSEN54-201ENST00000333213 USP17L8P0C7I0 530 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 USP5P45974 858 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 AKNAD1Q5T1N1 836 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 CERS3Q8IU89 383 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 STK11IPQ8N1F8 1099 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 NCOA7Q8NI08 942 aa27.54■■■□□ 2
TSEN54-201ENST00000333213 ZBTB12Q9Y330 459 aaPredicted RBP27.54■■■□□ 2
TSEN54-201ENST00000333213 LARGE1O95461 756 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 CYP2D6P10635 497 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 ANTXR2P58335 489 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 Q6ZUG5 572 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 TEX11Q8IYF3 940 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 STAG1Q8WVM7 1258 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 ZDHHC15Q96MV8 337 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 SLKQ9H2G2 1235 aaPredicted RBP27.53■■■□□ 2
TSEN54-201ENST00000333213 FOXD4L1Q9NU39 408 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 LIMCH1Q9UPQ0 1083 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 MAPKAPK5Q8IW41 473 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 MCM9Q9NXL9 1143 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 TPCN1Q9ULQ1 816 aa27.53■■■□□ 2
TSEN54-201ENST00000333213 PLCG2P16885 1265 aa27.52■■■□□ 2
TSEN54-201ENST00000333213 HDLBPQ00341 1268 aaKnown RBP27.52■■■□□ 2
TSEN54-201ENST00000333213 JDP2Q8WYK2 163 aa27.52■■■□□ 2
TSEN54-201ENST00000333213 B4E1Z4 1266 aa27.51■■■□□ 2
TSEN54-201ENST00000333213 SBK1Q52WX2 424 aa27.51■■■□□ 2
TSEN54-201ENST00000333213 CYB5R4Q7L1T6 521 aa27.51■■■□□ 2
TSEN54-201ENST00000333213 AGXT2Q9BYV1 514 aa27.51■■■□□ 2
TSEN54-201ENST00000333213 FLT1P17948 1338 aa27.51■■□□□ 1.99
TSEN54-201ENST00000333213 SLC4A8Q2Y0W8 1093 aa27.51■■□□□ 1.99
TSEN54-201ENST00000333213 CDC42EP5Q6NZY7 148 aa27.51■■□□□ 1.99
TSEN54-201ENST00000333213 GPHNQ9NQX3 736 aaPredicted RBP27.51■■□□□ 1.99
TSEN54-201ENST00000333213 ARPP21Q9UBL0 812 aaPredicted RBP27.51■■□□□ 1.99
TSEN54-201ENST00000333213 SERPINA10Q9UK55 444 aa27.51■■□□□ 1.99
TSEN54-201ENST00000333213 WDHD1O75717 1129 aaPredicted RBP27.5■■□□□ 1.99
TSEN54-201ENST00000333213 CUL4AQ13619 759 aa27.5■■□□□ 1.99
TSEN54-201ENST00000333213 ME3Q16798 604 aa27.5■■□□□ 1.99
TSEN54-201ENST00000333213 MFSD6Q6ZSS7 791 aa27.5■■□□□ 1.99
TSEN54-201ENST00000333213 RALYLQ86SE5 291 aaKnown RBP27.5■■□□□ 1.99
TSEN54-201ENST00000333213 MYO3BQ8WXR4 1341 aa27.5■■□□□ 1.99
TSEN54-201ENST00000333213 USP40Q9NVE5 1235 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 LAMB1P07942 1786 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 DDX60LQ5H9U9 1706 aaKnown RBP27.49■■□□□ 1.99
TSEN54-201ENST00000333213 NAV1Q8NEY1 1877 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 MCM5P33992 734 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 TRDNQ13061 729 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 C12orf60Q5U649 245 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 DDX4Q9NQI0 724 aaKnown RBP27.49■■□□□ 1.99
TSEN54-201ENST00000333213 FOCADQ5VW36 1801 aa27.49■■□□□ 1.99
TSEN54-201ENST00000333213 PRC1O43663 620 aa27.48■■□□□ 1.99
TSEN54-201ENST00000333213 FGRP09769 529 aa27.48■■□□□ 1.99
TSEN54-201ENST00000333213 DDIT3P35638 169 aa27.48■■□□□ 1.99
TSEN54-201ENST00000333213 BRF1Q92994 677 aa27.48■■□□□ 1.99
TSEN54-201ENST00000333213 ZSWIM5Q9P217 1185 aa27.48■■□□□ 1.99
TSEN54-201ENST00000333213 SAP30BPQ9UHR5 308 aaKnown RBP27.48■■□□□ 1.99
TSEN54-201ENST00000333213 PLCD1P51178 756 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 ST3GAL1Q11201 340 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 RBM5P52756 815 aaKnown RBP eCLIP27.47■■□□□ 1.99
TSEN54-201ENST00000333213 ANKRD1Q15327 319 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 CIAPIN1Q6FI81 312 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 ARHGAP27Q6ZUM4 889 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 FBXL16Q8N461 479 aa27.47■■□□□ 1.99
TSEN54-201ENST00000333213 FZD9O00144 591 aa27.46■■□□□ 1.99
TSEN54-201ENST00000333213 KDM4AO75164 1064 aa27.46■■□□□ 1.99
TSEN54-201ENST00000333213 HSP90AA1P07900 732 aaKnown RBP27.46■■□□□ 1.99
TSEN54-201ENST00000333213 YBX3P16989 372 aaKnown RBP eCLIP27.46■■□□□ 1.99
TSEN54-201ENST00000333213 CFAP100Q494V2 611 aa27.46■■□□□ 1.99
TSEN54-201ENST00000333213 NFIAQ12857 509 aa27.45■■□□□ 1.99
TSEN54-201ENST00000333213 RRP12Q5JTH9 1297 aaKnown RBP27.45■■□□□ 1.99
TSEN54-201ENST00000333213 PRMT6Q96LA8 375 aaPredicted RBP27.45■■□□□ 1.99
TSEN54-201ENST00000333213 CNNM2Q9H8M5 875 aa27.45■■□□□ 1.99
TSEN54-201ENST00000333213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.45■■□□□ 1.99
TSEN54-201ENST00000333213 PRDM1O75626 825 aa27.45■■□□□ 1.98
TSEN54-201ENST00000333213 PICALMQ13492 652 aa27.45■■□□□ 1.98
TSEN54-201ENST00000333213 AGBL3Q8NEM8 1001 aa27.45■■□□□ 1.98
TSEN54-201ENST00000333213 KRT23Q9C075 422 aa27.45■■□□□ 1.98
TSEN54-201ENST00000333213 RNF41Q9H4P4 317 aaPredicted RBP27.45■■□□□ 1.98
TSEN54-201ENST00000333213 WDR19Q8NEZ3 1342 aa27.44■■□□□ 1.98
TSEN54-201ENST00000333213 CACNB3P54284 484 aa27.44■■□□□ 1.98
TSEN54-201ENST00000333213 ECM29Q5VYK3 1845 aa27.44■■□□□ 1.98
TSEN54-201ENST00000333213 APOBRQ0VD83 1088 aa27.43■■□□□ 1.98
TSEN54-201ENST00000333213 NECAB1Q8N987 351 aa27.43■■□□□ 1.98
TSEN54-201ENST00000333213 DYNLL2Q96FJ2 89 aa27.43■■□□□ 1.98
TSEN54-201ENST00000333213 TOMM22Q9NS69 142 aa27.43■■□□□ 1.98
TSEN54-201ENST00000333213 FGD1P98174 961 aa27.43■■□□□ 1.98
TSEN54-201ENST00000333213 ZSCAN31Q96LW9 406 aaPredicted RBP27.43■■□□□ 1.98
TSEN54-201ENST00000333213 ROBO3Q96MS0 1386 aa27.42■■□□□ 1.98
TSEN54-201ENST00000333213 SHTN1A0MZ66 631 aa27.42■■□□□ 1.98
TSEN54-201ENST00000333213 IGDCC4Q8TDY8 1250 aa27.42■■□□□ 1.98
TSEN54-201ENST00000333213 TDRD3Q9H7E2 651 aaKnown RBP27.42■■□□□ 1.98
TSEN54-201ENST00000333213 SENP2Q9HC62 589 aa27.42■■□□□ 1.98
TSEN54-201ENST00000333213 DTNBO60941 627 aa27.41■■□□□ 1.98
TSEN54-201ENST00000333213 POLR3DP05423 398 aaPredicted RBP27.41■■□□□ 1.98
TSEN54-201ENST00000333213 SH2B1Q9NRF2 756 aaPredicted RBP27.41■■□□□ 1.98
TSEN54-201ENST00000333213 MYH1P12882 1939 aa27.41■■□□□ 1.98
TSEN54-201ENST00000333213 EVCP57679 992 aa27.41■■□□□ 1.98
TSEN54-201ENST00000333213 ZFPM1Q8IX07 1006 aa27.41■■□□□ 1.98
TSEN54-201ENST00000333213 INTS4Q96HW7 963 aaKnown RBP27.41■■□□□ 1.98
TSEN54-201ENST00000333213 SPDYE2BA6NHP3 402 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms