RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 RAB11FIP4Q86YS3 637 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 KLHL34Q8N239 644 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.21
TRAIP-201ENST00000331456 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
TRAIP-201ENST00000331456 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 TFIP11Q9UBB9 837 aaKnown RBP16.33■□□□□ 0.21
TRAIP-201ENST00000331456 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.2
TRAIP-201ENST00000331456 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
TRAIP-201ENST00000331456 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
TRAIP-201ENST00000331456 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
TRAIP-201ENST00000331456 UBAC1Q9BSL1 405 aa16.33■□□□□ 0.2
TRAIP-201ENST00000331456 AATFQ9NY61 560 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRAIP-201ENST00000331456 PODXL2Q9NZ53 605 aa16.33■□□□□ 0.2
TRAIP-201ENST00000331456 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-201ENST00000331456 COL23A1Q86Y22 540 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-201ENST00000331456 PANK2Q9BZ23 570 aa16.32■□□□□ 0.2
TRAIP-201ENST00000331456 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 LDHCP07864 332 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
TRAIP-201ENST00000331456 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 STK11IPQ8N1F8 1099 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
TRAIP-201ENST00000331456 JAG2Q9Y219 1238 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 DUOX1Q9NRD9 1551 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 RCAN1P53805 252 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 GUCY1B3Q02153 619 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 CD209Q9NNX6 404 aa16.31■□□□□ 0.2
TRAIP-201ENST00000331456 PPEF1O14829 653 aaPredicted RBP16.3■□□□□ 0.2
TRAIP-201ENST00000331456 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
TRAIP-201ENST00000331456 FBXO18Q8NFZ0 1043 aa16.3■□□□□ 0.2
TRAIP-201ENST00000331456 ARPP21Q9UBL0 812 aaPredicted RBP16.3■□□□□ 0.2
TRAIP-201ENST00000331456 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
TRAIP-201ENST00000331456 NID2Q14112 1375 aa16.3■□□□□ 0.2
TRAIP-201ENST00000331456 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
TRAIP-201ENST00000331456 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 USP17L21D6R901 530 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 BAG3O95817 575 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 IL1R1P14778 569 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
TRAIP-201ENST00000331456 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
TRAIP-201ENST00000331456 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
TRAIP-201ENST00000331456 CCDC196A0A1B0GTZ2 297 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 NPR1P16066 1061 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 RXRAP19793 462 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 CDC27P30260 824 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 PDE6BP35913 854 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 SBK1Q52WX2 424 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 WASF1Q92558 559 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
TRAIP-201ENST00000331456 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 FGRP09769 529 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
TRAIP-201ENST00000331456 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 IQCA1Q86XH1 822 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 CCDC144CPQ8IYA2 1237 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
TRAIP-201ENST00000331456 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 RTN1Q16799 776 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
TRAIP-201ENST00000331456 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
TRAIP-201ENST00000331456 TNKSO95271 1327 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 LRRC37AA6NMS7 1700 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 ORC4O43929 436 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 USP5P45974 858 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 PDE4BQ07343 736 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 TRIM29Q14134 588 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 AMOTL1Q8IY63 956 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 ZSCAN10Q96SZ4 725 aaPredicted RBP16.27■□□□□ 0.2
TRAIP-201ENST00000331456 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
TRAIP-201ENST00000331456 RCOR1Q9UKL0 485 aa16.27■□□□□ 0.2
TRAIP-201ENST00000331456 BAZ2AQ9UIF9 1905 aaKnown RBP16.27■□□□□ 0.19
TRAIP-201ENST00000331456 MMP10P09238 476 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 SRGNP10124 158 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 IFNAR1P17181 557 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 NT5C2P49902 561 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 PPP4CP60510 307 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 SEC23AQ15436 765 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 NTRK3Q16288 839 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 OTUD7BQ6GQQ9 843 aa16.26■□□□□ 0.19
TRAIP-201ENST00000331456 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms