RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 BRAPQ7Z569 592 aa20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 LRRN4CLQ8ND94 238 aa20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 ZNF213O14771 459 aa20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 E2F4Q16254 413 aa20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 DNAJC21Q5F1R6 531 aaKnown RBP20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 SWT1Q5T5J6 900 aaKnown RBP20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 KCND1Q9NSA2 647 aa20.78■□□□□ 0.92
TRAPPC12-201ENST00000324266 GPAA1O43292 621 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 PTPN21Q16825 1174 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 ERCC6LQ2NKX8 1250 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 TICAM2Q86XR7 235 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 SUGP1Q8IWZ8 645 aaKnown RBP20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 CCDC150Q8NCX0 1101 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 APPBP2Q92624 585 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 UBXN6Q9BZV1 441 aa20.77■□□□□ 0.92
TRAPPC12-201ENST00000324266 CMA1P23946 247 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 FANCCQ00597 558 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 NBPF20Q3BBV1 942 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 FAM89AQ96GI7 184 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 AK7Q96M32 723 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 NBPF3Q9H094 633 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 HSD3B7Q9H2F3 369 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 COL16A1Q07092 1604 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC12-201ENST00000324266 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 DPF2Q92785 391 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 MCTP2Q6DN12 878 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 PHKBQ93100 1093 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 ALG1Q9BT22 464 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 SENP2Q9HC62 589 aa20.75■□□□□ 0.91
TRAPPC12-201ENST00000324266 SYKP43405 635 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 GOLGA8FQ08AF8 430 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 GOLGA8DPQ0D2H9 430 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 SLC39A14Q15043 492 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 AKAP2Q9Y2D5 859 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 SPEF2Q9C093 1822 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 OAS2P29728 719 aaKnown RBP20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 TMCO3Q6UWJ1 677 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 CYB5R4Q7L1T6 521 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 REXO1L1PQ8IX06 675 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 SYNE4Q8N205 404 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
TRAPPC12-201ENST00000324266 KIF2AO00139 706 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 PNOCQ13519 176 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 SHC4Q6S5L8 630 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 TBC1D10CQ8IV04 446 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 PKD1L3Q7Z443 1732 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 CCDC189A1A4V9 331 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 UBE2Q2LH0YL09 131 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 ADAMTS2O95450 1211 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 ZCCHC17Q9NP64 241 aaKnown RBP20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 PSD3Q9NYI0 1048 aa20.73■□□□□ 0.91
TRAPPC12-201ENST00000324266 NUTM2BA6NNL0 878 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 NUTM2EB1AL46 878 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 KRT40Q6A162 431 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 TOM1L2Q6ZVM7 507 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 NUTM2AQ8IVF1 878 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 COL5A2P05997 1499 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 CDC27P30260 824 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 ATP6V1AP38606 617 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 MCAMP43121 646 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 METAP2P50579 478 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 EVA1CP58658 441 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 HOMER1Q86YM7 354 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 L2HGDHQ9H9P8 463 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 ARGLU1Q9NWB6 273 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
TRAPPC12-201ENST00000324266 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 ACTN2P35609 894 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 GNL2Q13823 731 aaKnown RBP20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 MICU3Q86XE3 530 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 ZCRB1Q8TBF4 217 aaKnown RBP20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 UBASH3AP57075 661 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 TRDNQ13061 729 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 INCENPQ9NQS7 918 aa20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
TRAPPC12-201ENST00000324266 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 SERPINC1P01008 464 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 TCIRG1Q13488 830 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 ARHGAP29Q52LW3 1261 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 SLC9C2Q5TAH2 1124 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 EXOC4Q96A65 974 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 RAI14Q9P0K7 980 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 IKBKBO14920 756 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 ATP8B1O43520 1251 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 IVLP07476 585 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 IFIT5Q13325 482 aaKnown RBP20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 PTPAQ15257 358 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 HSP90AA4PQ58FG1 418 aa20.7■□□□□ 0.9
TRAPPC12-201ENST00000324266 RNF217Q8TC41 542 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms