RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 MCM3P25205 808 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 ATP8B2P98198 1209 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 OTUD6BQ8N6M0 293 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
CCDC93-201ENST00000319432 OGFRQ9NZT2 677 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 SLC4A4Q9Y6R1 1079 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 ERVV-1B6SEH8 477 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 HGSO14964 777 aaPredicted RBP8.27□□□□□ -1.09
CCDC93-201ENST00000319432 SKILP12757 684 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
CCDC93-201ENST00000319432 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 SELENOSQ9BQE4 189 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 SYT17Q9BSW7 474 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 CACNB3P54284 484 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 XAGE2Q96GT9 111 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 CSADQ9Y600 493 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 PRDM1O75626 825 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 GSTO1P78417 241 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 MAPKAPK5Q8IW41 473 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 SYT10Q6XYQ8 523 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
CCDC93-201ENST00000319432 HIP1O00291 1037 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 SASH1O94885 1247 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 KRI1Q8N9T8 703 aaKnown RBP8.26□□□□□ -1.09
CCDC93-201ENST00000319432 TEKT1Q969V4 418 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 PSMD1Q99460 953 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 USP40Q9NVE5 1235 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 AAMPQ13685 434 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 EDC3Q96F86 508 aaKnown RBP8.26□□□□□ -1.09
CCDC93-201ENST00000319432 ZKSCAN5Q9Y2L8 839 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 PRAMEF18Q5VWM3 479 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 CCDC121Q6ZUS5 278 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 LPIN2Q92539 896 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 MED14O60244 1454 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 MCM5P33992 734 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 CLNS1AP54105 237 aaKnown RBP8.26□□□□□ -1.09
CCDC93-201ENST00000319432 MXRA7P84157 204 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 IMMTQ16891 758 aaKnown RBP8.26□□□□□ -1.09
CCDC93-201ENST00000319432 IQCA1Q86XH1 822 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 ZNF165P49910 485 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 GRAPQ13588 217 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 STX1AQ16623 288 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 TRIM22Q8IYM9 498 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 GRAPLQ8TC17 118 aaPredicted RBP8.26□□□□□ -1.09
CCDC93-201ENST00000319432 ARHGAP45Q92619 1136 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 CCDC114Q96M63 670 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 XDHP47989 1333 aa8.26□□□□□ -1.09
CCDC93-201ENST00000319432 ZNF213O14771 459 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 TTF1Q15361 905 aaPredicted RBP8.25□□□□□ -1.09
CCDC93-201ENST00000319432 CNNM3Q8NE01 707 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 CTNNA3Q9UI47 895 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 DENND2AQ9ULE3 1009 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 TMEM131LA2VDJ0 1609 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 PAFAH1B1P43034 410 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 CEP112Q8N8E3 955 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 UBA5Q9GZZ9 404 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 PCDHB15Q9Y5E8 787 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
CCDC93-201ENST00000319432 SPECC1LQ69YQ0 1117 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 RIOK3O14730 519 aaKnown RBP8.25□□□□□ -1.09
CCDC93-201ENST00000319432 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 DNAJC25Q9H1X3 360 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 KDM2BQ8NHM5 1336 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 MIGA2Q7L4E1 593 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 SPATA24Q86W54 205 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 NOP2P46087 812 aaKnown RBP8.25□□□□□ -1.09
CCDC93-201ENST00000319432 CPXCR1Q8N123 301 aa8.25□□□□□ -1.09
CCDC93-201ENST00000319432 USP42Q9H9J4 1324 aaKnown RBP8.24□□□□□ -1.09
CCDC93-201ENST00000319432 PDE1CQ14123 709 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-201ENST00000319432 BEND3Q5T5X7 828 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-201ENST00000319432 ZSCAN31Q96LW9 406 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-201ENST00000319432 MMRN2Q9H8L6 949 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 MYO3AQ8NEV4 1616 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 POTEB2H3BUK9 544 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 DIXDC1Q155Q3 683 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 KLHL40Q2TBA0 621 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 KRT26Q7Z3Y9 468 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 ANKRD44Q8N8A2 993 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 NECAB1Q8N987 351 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 TCEANC2Q96MN5 208 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 MAGEB6P1A0A0J9YX57 407 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 A0A1W2PRG0 241 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 PHKA1P46020 1223 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 NBPF11Q86T75 865 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 CCDC171Q6TFL3 1326 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 DDNO94850 711 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-201ENST00000319432 RASSF7Q02833 373 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 TNFAIP1Q13829 316 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 AOPEPQ8N6M6 819 aa8.24□□□□□ -1.09
CCDC93-201ENST00000319432 TGFBRAP1Q8WUH2 860 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms