RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 SBK1Q52WX2 424 aa19.16■□□□□ 0.66
TUBB3-201ENST00000315491 ZBED3Q96IU2 234 aaPredicted RBP19.16■□□□□ 0.66
TUBB3-201ENST00000315491 MINDY4BA8MYZ0 360 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 H7C1D1 291 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 PPARAQ07869 468 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 JAKMIP1Q96N16 626 aaKnown RBP19.15■□□□□ 0.66
TUBB3-201ENST00000315491 IDI2Q9BXS1 227 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
TUBB3-201ENST00000315491 GPRC5DQ9NZD1 345 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
TUBB3-201ENST00000315491 E7EWF7 191 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 STOX1Q6ZVD7 989 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 TM6SF1Q9BZW5 370 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 NBPF3Q9H094 633 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 ANAPC4Q9UJX5 808 aa19.14■□□□□ 0.66
TUBB3-201ENST00000315491 CYP2D7A0A087X1C5 515 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 WNT10BO00744 389 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 PSMA5P28066 241 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 CACNB3P54284 484 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 NFIAQ12857 509 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 RBM26Q5T8P6 1007 aaKnown RBP19.14■□□□□ 0.65
TUBB3-201ENST00000315491 DPY19L2Q6NUT2 758 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 TBC1D10CQ8IV04 446 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 AMOTL1Q8IY63 956 aa19.14■□□□□ 0.65
TUBB3-201ENST00000315491 ZNF70Q9UC06 446 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-201ENST00000315491 SAP30BPQ9UHR5 308 aaKnown RBP19.14■□□□□ 0.65
TUBB3-201ENST00000315491 NAV1Q8NEY1 1877 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 MYO1BO43795 1136 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
TUBB3-201ENST00000315491 POLR3DP05423 398 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-201ENST00000315491 CYP2D6P10635 497 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 SPDYE2Q495Y8 402 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 SAMD7Q7Z3H4 446 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 NEK1Q96PY6 1258 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 OSBPL5Q9H0X9 879 aaPredicted RBP19.13■□□□□ 0.65
TUBB3-201ENST00000315491 CDK5RAP2Q96SN8 1893 aa19.13■□□□□ 0.65
TUBB3-201ENST00000315491 LAMA4Q16363 1823 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 CLRN2A0PK11 232 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 EGFRP00533 1210 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
TUBB3-201ENST00000315491 KIF4BQ2VIQ3 1234 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 TBC1D10BQ4KMP7 808 aaPredicted RBP19.12■□□□□ 0.65
TUBB3-201ENST00000315491 C12orf60Q5U649 245 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 FAM198AQ9UFP1 575 aa19.12■□□□□ 0.65
TUBB3-201ENST00000315491 BAZ2AQ9UIF9 1905 aaKnown RBP19.12■□□□□ 0.65
TUBB3-201ENST00000315491 FOCADQ5VW36 1801 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 LMOD1P29536 600 aaPredicted RBP19.11■□□□□ 0.65
TUBB3-201ENST00000315491 STAG1Q8WVM7 1258 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 UPF3BQ9BZI7 483 aaKnown RBP19.11■□□□□ 0.65
TUBB3-201ENST00000315491 ZSWIM6Q9HCJ5 1215 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
TUBB3-201ENST00000315491 SMIM22K7EJ46 135 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 EPS15P42566 896 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 EVX2Q03828 476 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 AKNAD1Q5T1N1 836 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 BLOC1S2Q6QNY1 142 aa19.11■□□□□ 0.65
TUBB3-201ENST00000315491 RNF41Q9H4P4 317 aaPredicted RBP19.11■□□□□ 0.65
TUBB3-201ENST00000315491 ENTPD3O75355 529 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 SLC3A2P08195 630 aaKnown RBP19.1■□□□□ 0.65
TUBB3-201ENST00000315491 NEK4P51957 841 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 STK11IPQ8N1F8 1099 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 NCOA7Q8NI08 942 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 VEZTQ9HBM0 779 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 CYP46A1Q9Y6A2 500 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
TUBB3-201ENST00000315491 GLTPD2A6NH11 291 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 HMGB1P09429 215 aaKnown RBP19.09■□□□□ 0.65
TUBB3-201ENST00000315491 CPA1P15085 419 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 PLCD1P51178 756 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 TCP10Q12799 353 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 TRDNQ13061 729 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 FKBP1CQ5VVH2 108 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 MFSD6Q6ZSS7 791 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 RUFY3Q7L099 469 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 TTC6Q86TZ1 520 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 ZFPM1Q8IX07 1006 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 TRPM4Q8TD43 1214 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
TUBB3-201ENST00000315491 LAMB1P07942 1786 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 TCP10L2B9ZVM9 353 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 RPS6KB1P23443 525 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 RALYLQ86SE5 291 aaKnown RBP19.09■□□□□ 0.65
TUBB3-201ENST00000315491 INCENPQ9NQS7 918 aa19.09■□□□□ 0.65
TUBB3-201ENST00000315491 NEDD4P46934 1319 aa19.08■□□□□ 0.65
TUBB3-201ENST00000315491 ROBO3Q96MS0 1386 aa19.08■□□□□ 0.65
TUBB3-201ENST00000315491 ST18O60284 1047 aa19.08■□□□□ 0.64
TUBB3-201ENST00000315491 PCP11498 1178 aaKnown RBP19.08■□□□□ 0.64
TUBB3-201ENST00000315491 COL9A3Q14050 684 aaPredicted RBP19.08■□□□□ 0.64
TUBB3-201ENST00000315491 DHX36Q9H2U1 1008 aaKnown RBP19.08■□□□□ 0.64
TUBB3-201ENST00000315491 CNNM2Q9H8M5 875 aa19.08■□□□□ 0.64
TUBB3-201ENST00000315491 RTN4Q9NQC3 1192 aaKnown RBP19.08■□□□□ 0.64
TUBB3-201ENST00000315491 ADARB2Q9NS39 739 aaKnown RBP19.08■□□□□ 0.64
TUBB3-201ENST00000315491 HLA-DOAP06340 250 aa19.07■□□□□ 0.64
TUBB3-201ENST00000315491 FGRP09769 529 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms