RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 UBXN6Q9BZV1 441 aa15.44■□□□□ 0.06
SKA3-202ENST00000314759 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 CUTAO60888 179 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 MDM2Q00987 491 aaPredicted RBP15.43■□□□□ 0.06
SKA3-202ENST00000314759 NTRK3Q16288 839 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 SPECC1Q5M775 1068 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
SKA3-202ENST00000314759 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 BAG1Q99933 345 aaPredicted RBP15.43■□□□□ 0.06
SKA3-202ENST00000314759 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
SKA3-202ENST00000314759 RANBP6O60518 1105 aaKnown RBP15.43■□□□□ 0.06
SKA3-202ENST00000314759 OAS2P29728 719 aaKnown RBP15.43■□□□□ 0.06
SKA3-202ENST00000314759 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
SKA3-202ENST00000314759 MCAMP43121 646 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 FAM217BQ9NTX9 383 aaPredicted RBP15.42■□□□□ 0.06
SKA3-202ENST00000314759 B4E1Z4 1266 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 TPM1P09493 284 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 GNG11P61952 73 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 TOGARAM2Q6ZUX3 1019 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 PDILTQ8N807 584 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 TC2NQ8N9U0 490 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 ZBTB9Q96C00 473 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
SKA3-202ENST00000314759 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 CASQ1P31415 396 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
SKA3-202ENST00000314759 ADKP55263 362 aaKnown RBP15.41■□□□□ 0.06
SKA3-202ENST00000314759 FMR1Q06787 632 aaKnown RBP eCLIP15.41■□□□□ 0.06
SKA3-202ENST00000314759 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 CPLX2Q6PUV4 134 aaKnown RBP15.41■□□□□ 0.06
SKA3-202ENST00000314759 IGDCC4Q8TDY8 1250 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 ADD2P35612 726 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.06
SKA3-202ENST00000314759 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 COL18A1P39060 1754 aa15.41■□□□□ 0.06
SKA3-202ENST00000314759 ZBTB43O43298 467 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 STX10O60499 249 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 APPP05067 770 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 ZNF18P17022 549 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 SMC1AQ14683 1233 aaKnown RBP15.4■□□□□ 0.06
SKA3-202ENST00000314759 CC2D1AQ6P1N0 951 aaPredicted RBP15.4■□□□□ 0.06
SKA3-202ENST00000314759 KRI1Q8N9T8 703 aaKnown RBP15.4■□□□□ 0.06
SKA3-202ENST00000314759 LCMT1Q9UIC8 334 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 MAN1B1Q9UKM7 699 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 GRIN1Q05586 938 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 TRIM29Q14134 588 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 NFE2L3Q9Y4A8 694 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 MRFAP1Q9Y605 127 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 ATP8B1O43520 1251 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 LY9Q9HBG7 655 aa15.4■□□□□ 0.06
SKA3-202ENST00000314759 PKD1L3Q7Z443 1732 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 GOLGA6L9A6NEM1 432 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 PPP2R3AQ06190 1150 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 NFXL1Q6ZNB6 911 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 RSRC2Q7L4I2 434 aaKnown RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 PROSER2Q86WR7 435 aaPredicted RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 ELOA2Q8IYF1 753 aaPredicted RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 TXLNBQ8N3L3 684 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 GPR161Q8N6U8 529 aaKnown RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 PLEKHG2Q9H7P9 1386 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 GOLGA8AA7E2F4 631 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 TRIM66O15016 1216 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 PRR29P0C7W0 189 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 IFIT5Q13325 482 aaKnown RBP15.39■□□□□ 0.05
SKA3-202ENST00000314759 POSTNQ15063 836 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 ZNF827Q17R98 1081 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 TMEM87BQ96K49 555 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 MED15Q96RN5 788 aa15.39■□□□□ 0.05
SKA3-202ENST00000314759 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 CSF1RP07333 972 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 NT5DC1Q5TFE4 455 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 NOSTRINQ8IVI9 506 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 TRMT44Q8IYL2 757 aaKnown RBP15.38■□□□□ 0.05
SKA3-202ENST00000314759 DESI2Q9BSY9 194 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 PIH1D3Q9NQM4 214 aaKnown RBP15.38■□□□□ 0.05
SKA3-202ENST00000314759 POLR2DO15514 142 aaKnown RBP15.38■□□□□ 0.05
SKA3-202ENST00000314759 SARSP49591 514 aaKnown RBP15.38■□□□□ 0.05
SKA3-202ENST00000314759 SGMS1Q86VZ5 419 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 ENOX1Q8TC92 643 aaKnown RBP15.38■□□□□ 0.05
SKA3-202ENST00000314759 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 RIPOR2Q9Y4F9 1068 aa15.38■□□□□ 0.05
SKA3-202ENST00000314759 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
SKA3-202ENST00000314759 GUCY1A2P33402 732 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 ZSCAN26Q16670 478 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
SKA3-202ENST00000314759 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms